Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00291 ATGGCAGCGGCGCCGGGAAATCAAATGTTGGAGGGAGGAGTAGCTCCGCCGCAGCCTCCGGGGACTGACATGACCGGAATATGCTTCCGAGATCAGCTCTGGCTCAACAGTTTCCCTCTCGATCGCAACTTGGTCTTCGATTACTTTGCACTCTCCCCTTTCTACGATTGGACCTGCAACAACGAGCAACTCCGTATGCGCTCCGTTCACCCCCTCGACATCTCTCAACTCTCGAAAATGACGGGGACCGAGTATATGCTCAGCGAAGTTATGGAGCCGCACCTGTTTGTGATTCGCAAGCAGAAGAGAGATAGCCCCGACAAGGTTACACCTATGCTCGCCTATTACGTTCTCGATGGTTCTATTTACCAGGCTCCGCAACTGTGCAATGTTTTTGCCGCCAGAATTGGAAGGGCCCTTTATTACATACAAAAGGCTTTTACTACAGCTGCCTCCAAGTTGGAGAAGATTGGATATGCTGGGTCAGTTGATTCTGAAAATGAGACTGCATTGCTGGAATCAAAGACTGTTAAGGAGACAATCGACATAAAGGAAGTTAAGCGAGTGGATCATATTCTTGCATCCTTGCAACGCAAGTTACCACCAGCTCCACCTCCACCACCATTTCCAGAAGGGTATGTTCCACCTCCAACAGCAGAAAGTGAGAAAGGCACTGAAACTCAGGAAGCAGCAGAAACGCAAGCTCCTACTGCTGATCCCATAATTGATCAAGGACCAGCAAAAAGAATGAAATTTTGA 759 0.4888 MAAAPGNQMLEGGVAPPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYAGSVDSENETALLESKTVKETIDIKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAESEKGTETQEAAETQAPTADPIIDQGPAKRMKF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00291 252 PANTHER MED-6-RELATED 11 252 IPR007018 GO:0003712|GO:0006357|GO:0016592
Pumo7g00291 252 MobiDBLite consensus disorder prediction 1 21 - -
Pumo7g00291 252 Gene3D Mediator complex, subunit Med6 21 150 IPR038566 -
Pumo7g00291 252 FunFam Mediator of RNA polymerase II transcription subunit 6 21 150 - -
Pumo7g00291 252 MobiDBLite consensus disorder prediction 198 252 - -
Pumo7g00291 252 MobiDBLite consensus disorder prediction 199 215 - -
Pumo7g00291 252 PIRSF MED6_meta/plant 14 252 IPR016820 GO:0003712|GO:0006357|GO:0016592
Pumo7g00291 252 Pfam MED6 mediator sub complex component 27 152 IPR007018 GO:0003712|GO:0006357|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Pumo7g00291 Med6 7.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00291 K15128 - gmx:100792248 469.159