Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00289 ATGCATCTCATCGGCCAAATTACATTTCAGAGAACTGGAAACTCAAATAAGAAGAGTGATATCTACAGCTTTGGGATAATTCTATTTGAGTTAATCACTAGCCAACATGCAATATCAAGGACACCTGAAAAAAATATTCACATCCTTGAATGGGTTATTCCCATAGTCGAAAGAGGAGATATTCATAACATTGTTGATCCGAGGTTAAAGGAAGAATTCAATATCAATTCTTCATGGAAAGCTGTAGAGATTGCCCTGTCCTGCATTTCACCAAATGCAGATGAAAGGCCAGACATAAGCGAAATATTGTCACAGCTAAAGGAATGCCTATCTTCGGAAATGGATCAGAGAGATGACAAAAGAACAAGAACTACATTGGAATTGACTTCATTACAGATTGACTCAGACATTTCTCCCTTAGCTAGGTAG 429 0.3753 MHLIGQITFQRTGNSNKKSDIYSFGIILFELITSQHAISRTPEKNIHILEWVIPIVERGDIHNIVDPRLKEEFNINSSWKAVEIALSCISPNADERPDISEILSQLKECLSSEMDQRDDKRTRTTLELTSLQIDSDISPLAR 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00289 142 SUPERFAMILY Protein kinase-like (PK-like) 14 113 IPR011009 -
Pumo7g00289 142 Pfam Protein tyrosine and serine/threonine kinase 14 106 IPR001245 GO:0004672|GO:0006468
Pumo7g00289 142 ProSiteProfiles Protein kinase domain profile. 1 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00289 142 Gene3D Transferase(Phosphotransferase) domain 1 7 134 - -
Pumo7g00289 142 PANTHER OS07G0107800 PROTEIN-RELATED 9 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00289 Pumo-Chr7 3711067 3711834 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00289 9 142 Receptor kinase-like Gene Family AT3G46400 43.796 6.29e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pumo7g00289 PK_Tyr_Ser-Thr 1.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00289 - - mtr:25500366 175.637