Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00288 ATGCAAAGAGAAACGCAGTGGATTGTCATGTTAAAAGTAAGGGCATGGCTTGTCTTGGTTTCAGTTTTCATTACTCATACCAATTCAGCACTAGACACACCTGCTGCAAGAGAAATGATGACTAACAATAACAAACCAGCTGGCTTCATAAGCATTGATTGTGGGTCAGAAATAGCTTATTCGGACACCGAAACTGGAATGTGGTATGAGACAGACAATGGTTTTGTTGAAACAGGAACCAATCATATGGTTTCATCGACTGTGGACTTAAACTATCGTGATTTTAGGAGACAGTTGAACACGCTGAGATGCTTTCCAGAAGGAGAGAGGAACTGCTACACCCTGAAATTACCAGAGGAGGCCAAAAATAACAGCAATAAGTATCTCATCAGGGCGCTCTTTTCATATGGAAATTATGATGGCAAAGATGAAGCCCCTTCTTTCGACCTGTACATTGGAGTCAATCTTGCGCACAAAGTTAATCTCACTGATTACGCGTACAGTTACTGGACCACAGAGATTATTCACACCCCGTCAAGTGAAAGTGAAAGTATAGATGTGTGCCTTGTAAAACGTGGCTCCACATATATCCCTTGCATTGCTTCATTGGAATTACGCCCTTTGAACACTTCCATTTATCAGACTCCCATCGACTCCACCGCTACTCCACAGCCACTATTAAAACTTGAGCAAAGGGTTGACGCTGGCTCCCCTCCATTGCCTCCACCTTATCAAGACAATTTATTCTTTAGGTACAACGATGACGAGTATGATCGGACATGGCGCTATGATGGCCTCTTCGATATGAATTTGTATCCCTTCTTGGATATGAAATCTGTTAATTTTGACAATGGAAGCAGTGAGTATAAGTTACCGTCCCAAGTACTGAGAAGTGCAGTTCGATCGCGGAATGTCTCGCAGCCATTAGCATTTGACTTTGACAATCTGTTTTCTGAGCCCCTGGACAAGCCTTTTGAGTACTATGTCTACTTTCACTTTGCTGAAATTGAGCAACTTCCAGATGGACAAAAAAGAATCATCGATATCACCCTTGACTATGAAACCATCCTCCACCAGCCTTTGGTTCTTGAATACCTCAAGCCACTCACCATTCGTCCTCCAAAAACAACTCAAGGCTATGTTTCGTTTAACATTACTGCCACGTCAGAATCGGATGCTCCACCTATCCTCAACGCCTTCGAGATTTATCAGTTGATAACGCAACTTGATTCCCCAACACAAGCTGCAGATGTTGGTGCTATTGTTGACATCAAAAGCGCGTACCAGATCTCTAGATTGAATTGGCAAGGAGACCCATGTGTACCAAAGGAATATGCATGGGAGGGTCTCGTTTGCAGCTCCTACGAGACCATTCCAAGGATTACATCTTTGAACCTGAGCTCAAGCAAACTGATGGGGGAGATAAATATATCATTCTCACACCTTACAGAACTAGAATTCCTGGATTTGTCACACAATGAATTGGAAGGACGTTTGCCGGAATTTCTGGCAGAATTGCCAAAGCTAAAAATTCTTAATGTGACTGGGAACAAACTTTCGGGTCCAATTCCTGAGGCTCTCAAGGAAAAGGCAGATTTGCAATTAAGTGTGGCAGATAATCCTGATCTTTGCATCTTAGACTCATGCAAAAAGAAGAAATTTGTTACACCACTGGTTGCATCACTTTCAGCTTTGATTGTAACCTTCTTGGTCGCTCTTGGATTTTGGATAATCAAAAGAAGACAGAAAGTTTTGCTTTCTGATTTTAAGAAGGGGGGATCATTGGCATCAAAATATCGAGCATTTAGTTACAGTGAGATTCTCAATATTACTGAAAACTTCAAAACTGTTATTGGAGAAGGAGGATTTGGAAAAGTTTACTTTGGCATTCTACAAGATAACACTGAGGTCGCTGTTAAGTTGCTTTCTCCTTCGTCAGCACAAGGTTACAAGGAATTCCGATCAGAGGCACAACTTCTAGTGATTGTTCATCATAGAAATTTAGTTTCTCTCATTGGGTACTGTGATGAAGGTGAAAATAAAGCATTGACTTATGAATACATGGCCAATGGAAGTCTCCACCAACACTTATCAGTGAACAATCCAAATGTCTTGAAGTGGAATGAAAGACTTATTATAGCCGTTGATGCAGCACAAGGACTAGATTATCTTCATAATGGCTGTAAACCTCCTCTGATCCACAGAGATTTGAAGCCTTCCAACATATTACTAGATCAAAGCATGCATGCCAAGATAGCTGATTTTGGTCTATGTAGAGCTTTTGGCAGCGATACTGATTCTCATGTATCTACTCTACCTGCTGGTACACTAGGTTATGTTGATCCAGAATTTCAGAGAACCGGAAACTCAAATAAGAAGAGTGATATCTACAGCTTTGGGATAATTCTATTCGAGTTAATCACTGGCCAACATGCACTATCAAGGACACCAGAAAAAAATATTCACATCCTTGAATGGGTTATTCCCTTGGTTGATAGAGGAGATATTCATAACATTGTTGATCCGAGGTTAAAGGAAGAATTCAATATCAATTCTGCATGGAAAGCTGTAGAGATTGCCTTGTCATGCATTTCACCAACTGCAGCTGAAAGGCCAGACATAAGCCAAATATTGCCAGAGCTAAAGGAATGCCTATCTTTGGAGATGGTTCAGAGACATGTCAAAAGAGCAAGAACTATATTGGAATTGACTTCATTACGGATTGACTCAGAAATTTCTCCCTCAGTTAGGTAG 2754 0.4103 MQRETQWIVMLKVRAWLVLVSVFITHTNSALDTPAAREMMTNNNKPAGFISIDCGSEIAYSDTETGMWYETDNGFVETGTNHMVSSTVDLNYRDFRRQLNTLRCFPEGERNCYTLKLPEEAKNNSNKYLIRALFSYGNYDGKDEAPSFDLYIGVNLAHKVNLTDYAYSYWTTEIIHTPSSESESIDVCLVKRGSTYIPCIASLELRPLNTSIYQTPIDSTATPQPLLKLEQRVDAGSPPLPPPYQDNLFFRYNDDEYDRTWRYDGLFDMNLYPFLDMKSVNFDNGSSEYKLPSQVLRSAVRSRNVSQPLAFDFDNLFSEPLDKPFEYYVYFHFAEIEQLPDGQKRIIDITLDYETILHQPLVLEYLKPLTIRPPKTTQGYVSFNITATSESDAPPILNAFEIYQLITQLDSPTQAADVGAIVDIKSAYQISRLNWQGDPCVPKEYAWEGLVCSSYETIPRITSLNLSSSKLMGEINISFSHLTELEFLDLSHNELEGRLPEFLAELPKLKILNVTGNKLSGPIPEALKEKADLQLSVADNPDLCILDSCKKKKFVTPLVASLSALIVTFLVALGFWIIKRRQKVLLSDFKKGGSLASKYRAFSYSEILNITENFKTVIGEGGFGKVYFGILQDNTEVAVKLLSPSSAQGYKEFRSEAQLLVIVHHRNLVSLIGYCDEGENKALTYEYMANGSLHQHLSVNNPNVLKWNERLIIAVDAAQGLDYLHNGCKPPLIHRDLKPSNILLDQSMHAKIADFGLCRAFGSDTDSHVSTLPAGTLGYVDPEFQRTGNSNKKSDIYSFGIILFELITGQHALSRTPEKNIHILEWVIPLVDRGDIHNIVDPRLKEEFNINSAWKAVEIALSCISPTAAERPDISQILPELKECLSLEMVQRHVKRARTILELTSLRIDSEISPSVR 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00288 917 CDD STKc_IRAK 618 883 - -
Pumo7g00288 917 SUPERFAMILY L domain-like 445 534 - -
Pumo7g00288 917 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 688 894 - -
Pumo7g00288 917 ProSitePatterns Protein kinases ATP-binding region signature. 618 640 IPR017441 GO:0005524
Pumo7g00288 917 Gene3D Phosphorylase Kinase; domain 1 593 687 - -
Pumo7g00288 917 PANTHER OS07G0107800 PROTEIN-RELATED 50 885 - -
Pumo7g00288 917 Gene3D Transferase(Phosphotransferase) domain 1 688 903 - -
Pumo7g00288 917 ProSitePatterns Serine/Threonine protein kinases active-site signature. 732 744 IPR008271 GO:0004672|GO:0006468
Pumo7g00288 917 FunFam Leucine-rich repeat receptor-like kinase 416 545 - -
Pumo7g00288 917 FunFam Leucine-rich repeat receptor-like protein kinase 590 687 - -
Pumo7g00288 917 Gene3D Ribonuclease Inhibitor 420 545 IPR032675 -
Pumo7g00288 917 Pfam Protein tyrosine and serine/threonine kinase 614 881 IPR001245 GO:0004672|GO:0006468
Pumo7g00288 917 Pfam Malectin-like domain 52 404 IPR024788 -
Pumo7g00288 917 SUPERFAMILY Protein kinase-like (PK-like) 596 880 IPR011009 -
Pumo7g00288 917 Pfam Leucine rich repeat 459 519 IPR001611 GO:0005515
Pumo7g00288 917 ProSiteProfiles Protein kinase domain profile. 612 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00288 917 SMART serkin_6 612 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00288 Pumo-Chr7 3690877 3698031 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00288 47 886 Receptor kinase-like Gene Family AT2G19210 43.039 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pumo7g00288 Malectin_like 1.6e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00288 - - mtr:25500358 1109.36