Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00284 ATGGCCGTGCCTAACTCCCATCCTCCTCCTTCAATAGGCGTCATTTTCGGTTGCCATATAAAGTTCTCAATTTCTGCTACACTCAATGCATCCAAAGGAAGAAAAATTATTAAGATGAACATTGGAGCACTTGTTCTACTCTCTGCATTTTCCTTCCTGAGTTGTGGGCATGCACAAGACACAACCCTTGTGCCTGCAATCATAACTTTTGGTGACTCAGCCGTGGATGTAGGGAATAATGACTATCTCCCCACCCTTTTCAAGGCTAATTACCCTCCTTATGGGAGGGACTTTGTTAGCCACCAACCTACTGGGAGGTTTTGCAATGGCAAACTAGCTACTGATTTTACTGCTGACACATTGGGTTTCAAGACCTATGCTCCTGCATATCTTAGCCCACAGGCATCAGGGAAAAACCTCCTTATTGGAGCAAACTTTGCTTCAGCTGCATCTGGTTATGATGAAAATGCTGCTACTTTGAATCATGCTATTCCATTGTCCCAACAGTTGAGTTATTTCAAGGAATACCAAGGCAAGCTGGCCAAGGTAGCTGGCAGTAAAAAAGCAGCCTCAATTATCAAGGATGCATTGTACGTGCTCAGTGCTGGAAGCAGTGACTTTGTACAAAATTATTATGTCAATCCTTGGATCAACAAATTATACACCCCTGATCAGTATTCGTCCTACTTAGTTGGTGCATTCTCAAGTTTTGTTAAGGACTTGTATGGATTGGGAGCCAGGAGACTTGGAGTGACTTCACTCCCACCATTGGGTTGCCTGCCTGCTGCAAGGACTTTATTTGGTTTCCATGAGAATGGTTGTGTCTCAAGAATCAACACTGATGCCCAAGCATTTAACAAGAAGATCAGCTCAGCTGCAGCAAGTCTTCAAAAGCAACTTCCTGGTCTTAAGATTGCGGTTTTCGACATTTACAAGCCTCTCTATGACCTTGTTCAATCCCCTTCAAAATCCGGTTTCACGGAGGCAAATAGAGGTTGCTGTGGTACCGGGACTGTAGAGACAACATCCTTGTTGTGTAATCCAAAATCACCAGGAACTTGTTCTAATGCCACACAGTATGTGTTTTGGGACAGTGTCCATCCTTCACAGGCTGCTAACCAAGTTCTAGCTGATGCATTAATTTTGCAAGGCATAGCTCTTATCACATAA 1170 0.4368 MAVPNSHPPPSIGVIFGCHIKFSISATLNASKGRKIIKMNIGALVLLSAFSFLSCGHAQDTTLVPAIITFGDSAVDVGNNDYLPTLFKANYPPYGRDFVSHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQASGKNLLIGANFASAASGYDENAATLNHAIPLSQQLSYFKEYQGKLAKVAGSKKAASIIKDALYVLSAGSSDFVQNYYVNPWINKLYTPDQYSSYLVGAFSSFVKDLYGLGARRLGVTSLPPLGCLPAARTLFGFHENGCVSRINTDAQAFNKKISSAAASLQKQLPGLKIAVFDIYKPLYDLVQSPSKSGFTEANRGCCGTGTVETTSLLCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADALILQGIALIT 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00284 389 Pfam GDSL-like Lipase/Acylhydrolase 67 379 IPR001087 GO:0016788
Pumo7g00284 389 PANTHER GDSL ESTERASE/LIPASE EXL3 51 380 - -
Pumo7g00284 389 CDD SGNH_plant_lipase_like 65 381 IPR035669 -
Pumo7g00284 389 Gene3D SGNH hydrolase 55 384 IPR036514 -
Pumo7g00284 389 FunFam GDSL esterase/lipase APG 56 385 - -
Pumo7g00284 389 SUPERFAMILY SGNH hydrolase 67 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00284 Pumo-Chr7 3377490 3379633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00284 63 378 Acyl Lipid Metabolism Gene Families AT4G10950 32.075 1.09e-61 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00284 - - gmx:100793645 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00284 7 3377490 3379633 Pumo7g00284 7 3377490 3379633 ECH
Pumo4g04173 4 82633374 82640434 Pumo7g00284 7 3377490 3379633 PCT