Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00274 ATGGGGAAAGCAAGCAGGTGGTTGAAGGGGTTGTTGGGGATGAAGAAGGAGAAGGACCACAGTGACAATTCAGGCTTATTGGCTCTTGACAAGAAGGAGAAGAAAAGGTGGAGTTTTGCTAAGCCAGGGAAGGATGTGCCACCTTCAGTTCCTGCCACTGATAACACCTGGCTCAGATCCTATATTTCTGAGACAGAGAATGAGCAGAACAAACATGCAATTGCTGTGGCAGCTGCCACTGCGGCGGCTGCCGATGCCGCCGTGGCCGCCGCACAGGCGGCCGTGGCGGTTGTGAGGCTGACAAGCCAGGGGAGAGGAGCACTGTTCAGTGGAAGCAGGGAGAAGTGGGCTGCTGTGAAGATCCAAACTTTTTTTAGAGGCTACTTGGCACGGAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGGTATTTGGTTAGAAAGAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAAACTGCTGTTAGAACACAGCGAGCACGTCGTTCCATGAGCAAAGAAAACAGATTTCTACCTGAAGTTCTTGCAAGAAAATCTGTGGAACGATTTGATGAAACAAGGAGTGAATTCCACAGTAAAAGGCTACCTACATCCTATGAAACATCCTTGAATGGTTTTGATGAGAGCCCCAAGATTGTTGAAATTGACACATACAAGACTCGATCAAGGTCTAGGCGCTTTACCTCTACAATGTCTGAGTGTGGAGAAGACATGTCCTGTCATGCAATCTCATCCCCTCTTCCTTGTCCGGTCCCCGGTCGAATCTCGGTTCCTGATTGCAGACACCTTCAAGATTTTGATTGGTACTTGAATGTTGATGAGTGTAGATTCTCCACTGCTCATAGCACCCCACGTTTCACAAACTATGTGAGGCCTAATGCTCCAGCTACACCAGCAAAGAGTGTTTGTGGGGACACCTTCTTCAGACCTTGCTCCAATTTCCCCAACTACATGGCCAATACTCAGTCATTCAAGGCAAAACTAAGGTCTCACAGTGCTCCAAAGCAAAGACCTGAACCCAAGAAAAGGCTCTCACTCAATGAAATGATGGCAGCAAGAAACAGCATAAGTGGTGTTAGAATGCAAAGGCCATCATCCAATTTCTTCCAGACTCAAGAAGAATCCTGGAATTTTTGA 1191 0.4727 MGKASRWLKGLLGMKKEKDHSDNSGLLALDKKEKKRWSFAKPGKDVPPSVPATDNTWLRSYISETENEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGALFSGSREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTAVRTQRARRSMSKENRFLPEVLARKSVERFDETRSEFHSKRLPTSYETSLNGFDESPKIVEIDTYKTRSRSRRFTSTMSECGEDMSCHAISSPLPCPVPGRISVPDCRHLQDFDWYLNVDECRFSTAHSTPRFTNYVRPNAPATPAKSVCGDTFFRPCSNFPNYMANTQSFKAKLRSHSAPKQRPEPKKRLSLNEMMAARNSISGVRMQRPSSNFFQTQEESWNF 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00274 396 Pfam Protein of unknown function (DUF4005) 307 375 IPR025064 -
Pumo7g00274 396 SMART iq_5 113 135 IPR000048 GO:0005515
Pumo7g00274 396 SMART iq_5 136 157 IPR000048 GO:0005515
Pumo7g00274 396 Gene3D - 67 140 - -
Pumo7g00274 396 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Pumo7g00274 396 PANTHER IQ-DOMAIN 5-RELATED 1 365 - -
Pumo7g00274 396 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Pumo7g00274 396 Pfam IQ calmodulin-binding motif 116 135 IPR000048 GO:0005515
Pumo7g00274 396 Pfam IQ calmodulin-binding motif 141 155 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00274 Pumo-Chr7 3243442 3246118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00274 1 379 IQD Protein Family AT3G16490 55.980 3.04e-114 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00274 - - gmx:100797686 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00274 7 3243442 3246118 Pumo7g00274 7 3243442 3246118 ECH
Pumo4g04180 4 82681429 82683124 Pumo7g00274 7 3243442 3246118 PCT