Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00270 ATGATGGTTCTGTTGCAAAAACTCCAATGGGGGTTGCTTCTTCTCTTTCTCCTCTTTCAGCTCCACCTTCACTGCAGCACCTGTTACCCCACAGAACCAATGAACTGTACGGACACAAGCCGCGTTTGCACTTCTTTCATGGCCTTCAAGCCTGGACCGAACCACACACTTGCTCTGATTCAAAGCATGTTTGATGTGTTGCCTGGTGACATCACAGTTGAAGGCAACGGTTGGGGTTACATGTTCATAAGGAAGAACTGTTCTTGTGCTGCTGGTATAAAAAAATACGTGTCCAACACCACTTTTACCGTGAAATCCAATGAGGGGTTGGTGTATGACATGGTGATGGATGCCTATGATGGCCTTGCTTTCCTTCCCAACACAACCAGGAGGTCTAGGAATGGTGCTGTTGTGTCACTCAGGTTGTTTTGTGGCTGCTCCAGTGGACTGTGGAACTATTTTGTCAGTTATGTGATGAGAGATGGGGATAGTGTTGAGTCCTTGGCAAGCAGGTTTGGGGTTAGTATGGATAGCATTGAGAGTGTGAATGGCATTGGTAATCCTGATAATGTCACTGTTGGTTCACTTTATTATATACCCCTTGATTCTGTTCCTGGTGATCCTTATCCCCTGAATAATGCTGCTCCACCAGTTCCTGTTCCTTCCCCATCCTTTGATAATTTTTCAGCTGATCAAGTCAATCATAAGGCTCATGTACCCTACGGATGGATCATTGGGGGCTTAGGAGTTGGTCTTCTTCTAATAATATTAGCTGTGATTCTCTGTGTTTGTCTGAGATCATCAAATTGTTTTGCTGATGCCAGAACTCATGAGAAAGATGCTGAGGGCAAGATCTCTCATAAATTCCATATTCTTCGGAACCCAAGTTTTTTTTGTGGTTCTGGAAGGTACATATGTGGCAAGCATGTTGAGCAGAAGCAAACAGATGCTGAATCCAGCAATCACACGATTACCATTCCCAAAGCTTCAACTCTTGGGCCTGACGTATTTGACATGGATAAGCCTGTTGTTTTTACATATGAAGATATTTTCTCCACAACTGATGGTTTCTCTGATTCAAATCTACTTGGGCATGGAACATATGGTTCTGTTTATTATAGCCTCCTTCGTGATCAGGAAGTTGCTATTAAAAAAATGACAGCTACTAAAACAAAAGAGTTTATGTCAGAGATGAAAGTTTTGTGCAAGGTTCATCACACTAATCTGGTAGAATTGATTGGCTATGCAGCTAGTCATGAGGAGCTTTTCCTAGTTTATGAATATGCTCAGAAGGGTTCACTCAGAAGCCATTTGCATGATCCTCAAAATAAGGGTCACTCCCCACTTTCTTGGATCATGAGGGTTCAGATTGCACTTGATGCTGCTAGGGGCCTTGAATACATACACGAGCACACAAAAACTCATTATGTTCACCGTGATATCAAGACAAGTAACATTTTGCTTGATGCTTCCTTTAGAGCAAAGATTTCTGATTTTGGGTTAGCAAAACTTGCTGGGAAAGCAAATGAGGGAGAAATTTCAACTACCAAAGTTGTTGGTACATATGGATATCTTGCTCCAGAATATTTGAGTGATGGTCATGCGACCACTAAAAGTGATGTCTATGCATTTGGTGTTGTCCTTTTTGAGATTATATCAGGGAAGGAGGCCATCATTCGATCAGAAGGCACAATGACAAAAAATCCTGAAAGACGTTCACTGGCATCCATAATGCTGGGAGTTCTTAGGAATTCACCTGATTCTATGAGCATGTCAAGCTTGAGAGAATATATTGATCCAAATATGATGGATCTGTATCCCCATGATTGTGTATTTAAGATGGCCACGTTGGCAAAGCAATGTGTGGATGAGGACCCCATCTTACGACCTGATATGAGACAAGTTGTGATATCCCTCTCACAGATTCTCCTGTCTTCAGTTGAGTGGGAAGCAACTCTAGCTGGGAATAGCCAGGTTTTCAGTGGCCTTGTTCAGGGAAGATAG 2004 0.4247 MMVLLQKLQWGLLLLFLLFQLHLHCSTCYPTEPMNCTDTSRVCTSFMAFKPGPNHTLALIQSMFDVLPGDITVEGNGWGYMFIRKNCSCAAGIKKYVSNTTFTVKSNEGLVYDMVMDAYDGLAFLPNTTRRSRNGAVVSLRLFCGCSSGLWNYFVSYVMRDGDSVESLASRFGVSMDSIESVNGIGNPDNVTVGSLYYIPLDSVPGDPYPLNNAAPPVPVPSPSFDNFSADQVNHKAHVPYGWIIGGLGVGLLLIILAVILCVCLRSSNCFADARTHEKDAEGKISHKFHILRNPSFFCGSGRYICGKHVEQKQTDAESSNHTITIPKASTLGPDVFDMDKPVVFTYEDIFSTTDGFSDSNLLGHGTYGSVYYSLLRDQEVAIKKMTATKTKEFMSEMKVLCKVHHTNLVELIGYAASHEELFLVYEYAQKGSLRSHLHDPQNKGHSPLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDASFRAKISDFGLAKLAGKANEGEISTTKVVGTYGYLAPEYLSDGHATTKSDVYAFGVVLFEIISGKEAIIRSEGTMTKNPERRSLASIMLGVLRNSPDSMSMSSLREYIDPNMMDLYPHDCVFKMATLAKQCVDEDPILRPDMRQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00270 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Pumo7g00270 667 ProSitePatterns Protein kinases ATP-binding region signature. 363 385 IPR017441 GO:0005524
Pumo7g00270 667 Pfam LysM domain 157 194 IPR018392 -
Pumo7g00270 667 Gene3D Transferase(Phosphotransferase) domain 1 430 654 - -
Pumo7g00270 667 ProSiteProfiles LysM domain profile. 155 199 IPR018392 -
Pumo7g00270 667 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 81 661 IPR044812 GO:0019199|GO:0045087
Pumo7g00270 667 Pfam Protein tyrosine and serine/threonine kinase 361 637 IPR001245 GO:0004672|GO:0006468
Pumo7g00270 667 FunFam Kinase family protein 332 428 - -
Pumo7g00270 667 FunFam PTI1-like tyrosine-protein kinase 3 429 653 - -
Pumo7g00270 667 SUPERFAMILY Protein kinase-like (PK-like) 336 639 IPR011009 -
Pumo7g00270 667 ProSiteProfiles Protein kinase domain profile. 357 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00270 667 SUPERFAMILY LysM domain 155 200 IPR036779 -
Pumo7g00270 667 Gene3D Phosphorylase Kinase; domain 1 333 428 - -
Pumo7g00270 667 Gene3D LysM domain 151 205 IPR036779 -
Pumo7g00270 667 SMART LysM_2 156 200 IPR018392 -
Pumo7g00270 667 SMART serkin_6 357 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00270 Pumo-Chr7 3192238 3198719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00270 32 667 Receptor kinase-like Gene Family AT1G51940 69.099 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pumo7g00270 PK_Tyr_Ser-Thr 5.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00270 - - gmx:100796989 1225.31