Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00265 ATGTTCTCCTCCAATGCATCCTCCTTCATGTGCAAGTCAGGCATAGGTGGGTGGTCTTCGTGCAGCAACTTCTCTGCTTCACAGAGGAAGCGTTCGGGTTCTTCGAGAGTGACGTGTTGTGCTCCAAGCAATAGCAGAAGTCACGGCGGCGTTCTGATGGAGAATGAGATAAATGGCGCTTCCACGGTGGCCGACGCCGACGTCAACCCCACCCCCGGCGGCGGCGTTCGGGATGTGTACGGCGAGGATAAGGCCACCGAGGATCAGTTTGTGACTCCTTGGAGTATCTCTGTTGCTAGTGGATATACTTTGTTGAGAGATCCACACTACAACAAAGGGCTCGCCTTCACTGAAAAAGAGAGGGACGCTCATTACTTGCGTGGCCTTCTTCCCCCAACAGTTATTTCTCAAGAAACTCAGGTGAAGAAAATGATCCAACATATACGCCAGTATCAAGTTCCATTGCACAAGTACATGGCAATGATGGATCTTCAGGAGAGAAATGAAAGGCTGTTTTACAAGCTTCTACTTGATCATGTTGAGGAGTTACTCCCAGTTGTCTATACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGGAGCATCTTCATGCATCCACAGGGTCTTTATATAAGTTTGAAGGAGAAAGGGAGGATTCTTGAAGTACTAAGGAATTGGCCTGAGAAGAACATTCAAGTCATTGTTGTAACTGACGGAGAGCGAATTCTGGGTCTTGGGGACCTTGGTTGTCAGGGGATGGGAATACCAGTAGGAAAACTTTCTTTATATACAGCACTTGGTGGAGTTCGGCCTTCTGCTTGCTTGCCTATTACCATCGATGTGGGCACAAACAATGAGAAGTTGTTGAATGATGAATTATATATAGGGCTTAAGCATAGACGAGTAACTGGGCAGGAATATGCTGAACTTCTGCATGAATTTATGAATGCAGTCAAGCAAAATTATGGTGAAAAAATCCTCGTTCAGTTTGAAGACTTTGCAAACCACAATGCTTTTGATCTACTTGAAAAATATAGGTCAACACATCTTGTCTTTAATGATGATATTCAGGGAACAGCATCAGTGGTCCTTGCAGGACTAGTTGCAGCTCTGAAATTGGTTGGGGGAGACTTAACTGATCACAGGTTCTTATTCCTTGGTGCTGGAGAGGCTGGCACTGGAATAGCAGAACTCATAGCACTTGAAACATCAAAACGGACAAAGGTCCCACTGGAAGAAGTGCGCAAGAACATTTGGTTGGTGGACTCAAAGGGTTTGATTGTGAGTTCCCGTAAAGAATCACTTCAACATTTTAAGAAGCCATGGGCTCATGAACATGAACCTGTGAAGGAACTTGTAGATGCTATTAATCAAATTAAGCCAACAGTGTTAATTGGAACATCAGGACAAGGGAGAACTTTTACTAAGGAAGTGGTTGAAGCTATGGCTTCCAATAATGAGAAACCTATTATTCTTGCTCTTTCCAACCCGACATCACAGTCGGAATGCACTGCTGAAGAAGCTTATACTTGGAGCCAGGGACGCGCCATTTTTGCTAGTGGGAGCCCATTTGCCCCAGTTGAATATAATGGAAAAGTGTTTGTGCCTGGCCAGGCTAACAATGCATACATTTTCCCTGGATTTGGTCTTGGTTTAATAATGTCCGGGACCATTCGAGTGCATGATGACCTGCTTCTGGCAGCTTCTGAGGCTTTGGCTTCACAGGTGACTCAGGAGGACTATGACAAGGGACTCATATACCCACCATTCAGCAACATCAGAAAGATTTCAGCACACATTGCTGCCACTGTGGCTGCTAAGGCCTATGAGCTTGGCTTGGCCACTCGCCTTCCTCAACCAAAAGATTTGGTGAAGTTTGCTGAGAGCTCTATGTATACACCTGTCTATAGAGGCTACCGGTGA 1923 0.455 MFSSNASSFMCKSGIGGWSSCSNFSASQRKRSGSSRVTCCAPSNSRSHGGVLMENEINGASTVADADVNPTPGGGVRDVYGEDKATEDQFVTPWSISVASGYTLLRDPHYNKGLAFTEKERDAHYLRGLLPPTVISQETQVKKMIQHIRQYQVPLHKYMAMMDLQERNERLFYKLLLDHVEELLPVVYTPTVGEACQKYGSIFMHPQGLYISLKEKGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLNDELYIGLKHRRVTGQEYAELLHEFMNAVKQNYGEKILVQFEDFANHNAFDLLEKYRSTHLVFNDDIQGTASVVLAGLVAALKLVGGDLTDHRFLFLGAGEAGTGIAELIALETSKRTKVPLEEVRKNIWLVDSKGLIVSSRKESLQHFKKPWAHEHEPVKELVDAINQIKPTVLIGTSGQGRTFTKEVVEAMASNNEKPIILALSNPTSQSECTAEEAYTWSQGRAIFASGSPFAPVEYNGKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALASQVTQEDYDKGLIYPPFSNIRKISAHIAATVAAKAYELGLATRLPQPKDLVKFAESSMYTPVYRGYR 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00265 640 SMART malic_2 165 346 IPR012301 GO:0004471
Pumo7g00265 640 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 356 639 IPR036291 -
Pumo7g00265 640 Pfam Malic enzyme, NAD binding domain 356 608 IPR012302 GO:0051287
Pumo7g00265 640 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 80 355 IPR046346 -
Pumo7g00265 640 FunFam Malic enzyme 354 640 - -
Pumo7g00265 640 PIRSF ME 74 640 IPR001891 GO:0004470|GO:0004471
Pumo7g00265 640 PRINTS Malic enzyme signature 352 368 IPR001891 GO:0004470|GO:0004471
Pumo7g00265 640 PRINTS Malic enzyme signature 267 289 IPR001891 GO:0004470|GO:0004471
Pumo7g00265 640 PRINTS Malic enzyme signature 383 399 IPR001891 GO:0004470|GO:0004471
Pumo7g00265 640 PRINTS Malic enzyme signature 327 345 IPR001891 GO:0004470|GO:0004471
Pumo7g00265 640 PRINTS Malic enzyme signature 486 502 IPR001891 GO:0004470|GO:0004471
Pumo7g00265 640 PRINTS Malic enzyme signature 231 260 IPR001891 GO:0004470|GO:0004471
Pumo7g00265 640 PRINTS Malic enzyme signature 171 195 IPR001891 GO:0004470|GO:0004471
Pumo7g00265 640 PANTHER MALIC ENZYME-RELATED 74 638 - -
Pumo7g00265 640 FunFam Malic enzyme 99 353 - -
Pumo7g00265 640 SMART Malic_M_2 356 609 IPR012302 GO:0051287
Pumo7g00265 640 Pfam Malic enzyme, N-terminal domain 165 346 IPR012301 GO:0004471
Pumo7g00265 640 CDD NAD_bind_1_malic_enz 356 634 - -
Pumo7g00265 640 Gene3D - 99 353 IPR037062 GO:0004471
Pumo7g00265 640 ProSitePatterns Malic enzymes signature. 352 368 IPR015884 GO:0004471
Pumo7g00265 640 Gene3D - 354 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00265 Pumo-Chr7 3112891 3118463 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00265 K00029 - gmx:100785718 1171.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00265 7 3112891 3118463 Pumo7g00265 7 3112891 3118463 ECH
Pumo7g00265 7 3112891 3118463 Pumo4g04192 4 82834579 82841316 ECH
Pumo6g03178 6 74586650 74591294 Pumo7g00265 7 3112891 3118463 ECH
Pumo10g00974 10 12631450 12636376 Pumo7g00265 7 3112891 3118463 ECH
Pumo7g00265 7 3112891 3118463 Pumo10g00974 10 12631450 12636376 ECH
Pumo7g00265 7 3112891 3118463 Pumo6g02512 6 58735134 58736247 ECH
Pumo7g00265 7 3112891 3118463 Pumo7g00766 7 13482014 13482483 ECH
Pumo7g00265 7 3112891 3118463 Pumo5g00220 5 5400398 5402503 ECH
Pumo4g04192 4 82834579 82841316 Pumo7g00265 7 3112891 3118463 PCT