Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00239 ATGATGGCTGGGAACCCTAACTGGTGGAGTATGCATCCACCATCTTTGATCCCTCCCCAGTATGTGCTTGGATCTTCTTCAATTCCTTTTAATTCTTCTACACAAAACCAAGAGCCCCCTCAGTCATTGAGCCAACTTCTTTTCACTGGTTTACCAGGAGAGGAAGAGAGAGTTGCATTCAGTCATTTTCAATCTAAAAAGTTGGATGAATGGAATGAACATATGCTTAATCCACCCCCCATAGTGCCTATGGCTGATGTAATAAAGCAAGAGGTTTCCCAAAGTGGCAACTTATATCACCATGGACATGATCAGGAATTTCAGGTTTCTGGGGCACCTTGGTCACATATGGTGCCAGTTTCTTCTTCCCCTAGGTCTAGTGTTGCTAGCTTCAGTAGTAATAATTTATTGGATTTCACTTATAACAAGGCAGATCATAGGAAGAACCAACTACCAGATCACACATCCGAGTGTAATAGCATAGCCACTGCTGGAGTTTACAAGAAGAGTAAGAGTCAACCATCTTCAAGCCAACCACCTCTCAAGGTGAGAAAGGAGAAGCTAGGTGATAGAATAACAGCTCTTCACCAGCTAGTTTCCCCATTCGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATACATAAGATTCCTTCAGGGTCAAATTGAGGCACTCAGTTCTCCTTACTTGGGCAATGGATCAAAAAACATGAGGAATCCACAGTCTCAACAGGTACACGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGACAATGGCCTGAAAAGAAAGGGAGCTCCAAACCAGGATGCAAAAGATAAGCCAAAGGACTTGAGGAGTAGAGGGCTATGCTTGGTTCCTGTGTCTTGTACCCAACATGTTGGAAATGAAAATGGAGCTGATTACTGGGCACCAGCATATGGCAGTGGATTTTAA 960 0.4365 MMAGNPNWWSMHPPSLIPPQYVLGSSSIPFNSSTQNQEPPQSLSQLLFTGLPGEEERVAFSHFQSKKLDEWNEHMLNPPPIVPMADVIKQEVSQSGNLYHHGHDQEFQVSGAPWSHMVPVSSSPRSSVASFSSNNLLDFTYNKADHRKNQLPDHTSECNSIATAGVYKKSKSQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGSKNMRNPQSQQVHGERNSVFPEDPGQLLNDNGLKRKGAPNQDAKDKPKDLRSRGLCLVPVSCTQHVGNENGADYWAPAYGSGF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00239 319 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 221 IPR011598 GO:0046983
Pumo7g00239 319 MobiDBLite consensus disorder prediction 236 252 - -
Pumo7g00239 319 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 182 233 IPR036638 GO:0046983
Pumo7g00239 319 FunFam Transcription factor bHLH123 family 182 245 - -
Pumo7g00239 319 CDD bHLH_AtbHLH_like 182 229 IPR045239 -
Pumo7g00239 319 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 33 301 - -
Pumo7g00239 319 MobiDBLite consensus disorder prediction 236 286 - -
Pumo7g00239 319 Gene3D - 182 240 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00239 Pumo-Chr7 2682847 2686422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00239 136 263 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 60.741 3.91e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00239 - - gmx:100802121 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00239 7 2682847 2686422 Pumo7g00239 7 2682847 2686422 ECH