Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00221 ATGTCGTCGTCTCCGGCGCCGGCGGAGGCTCCTTCCGCCTCTCCTCCTCCGCCGGATACCACTCCCCTACCTAACTCCACTGTCTCCCCTCCTCCGCCTCCCGCCACCACCAATGCCACCGTTTCTCCTCCGCCGCCGCCGGTCGCCTTCGCTCCGGCCAGTCCCGGTAACAACGGGTTGTCGCCGGGTACATTGAGCGGAATAATTATAGGGGCCGTGTTAGGTTCGGTAGGTATGCTTATCATTGGGGGCATTTTCTTCTGCTTCTATAGGAATTGGAAAAGGAAGAGAAGCCAGAACAACCACTCGCAACCGCCACAACCAAAAGATGACATGGCTGGTAGCATACTTCAGCATTGGCAAGATAGTGTTCCTCCAACGACAGATGGTAAAGTAGGCTTGCCACCCAAGCCTCCTCCCGGGGGTTTAGTGAATCAGCAACAGTCATCTGCTGGTCTCCCCACACCCGCTGTGAATTCTTCGAATACCAGCAGTAGTTTGGGGTCTGACAAGGCGAAGCCATACAAGTCCCTAACTCCTGGCATTTCCTTGGCGCTATCTCAAAGCACTTTTACGTATGACGAATTAGCTATGGCAACGGATGGGTTCTCCAAATCAAATCTTCTTGGTCAAGGTGGTTTTGGCTATGTCCACAAAGGAGTTCTCCCGAATGGAAAAATTGTTGCAGTCAAGCAGTTGAAATCTGAGAGTAGACAGGGGGAGCGTGAGTTCCATGCAGAAGTCGAGGTCATTAGCCGTGTGCATCACAGACATCTTGTTTCCCTAGTTGGATACTGCATCTCAGACAGCCAGAAGATGCTTGTCTACGAGTATGTCCAAAATAATACACTAGAATTTCATTTGCATGGAAAGGACAGACCATCTATGGACTGGTCAACAAGGATGAAGATTGCTGTAGGATCTGCAAAAGGATTGGCATATCTGCATGAGGACTGTAATCCTAAAATCATACACCGAGACATCAAGGCATCTAACATTCTTCTTGATGATAGTTTTGAGGCTAAGGTTGCAGATTTTGGGCTTGCAAAATTTTCATCAGACACAGACACCCATGTTTCTACTAGAGTGATGGGAACTTTTGGATACATGGCTCCAGACTATGCTACTAGTGGGAGACTCACTAAAATGTCAGATGTTTTCTCCTTTGGTGTTGTGCTTTTGGAGTTGATTACTGGACGAAAACCTAATGATAAAAATCAACCCTTTAAAGAGGGCAGCATGGTTGAATGGGCGAGGCCTTTCCTGTACCAAGCTTTGAAAAATGGCAACTTTGATGGACTTGTTGATCCAAAGTTGCAGAAAACTTACATTCTTGAGGAGATGATTCGAATGATTACTTGTGCTGCGGCTTGTGTGCTCAATCGACCCATGTTCCGGCCTCAAATGAGCCAAGTTCGTCTAGCTCTGGAAGGATTTTTTCCTCTAAATGATCTAAAGGCGGGGATCACACCTGGACCCAGCAATGTTTCTGATTACTTTAATGATGGTGTCCAATACAATGAAGACCTAAGGAAGACATTCATGAATATGGCACTGGGAAGCAAAGAGCCAGGCATTAGTGAGTACAGTGGTCCCAGCAGCAAGTTTGGTCAACATCCATCTGTCTCAATCCCTTTGGGCCAACAAAGTACACCAGGAAATGGAAATGGGAATGGGTGTGGCAACCTTGATTCTGGACAAGTTTGA 1707 0.4745 MSSSPAPAEAPSASPPPPDTTPLPNSTVSPPPPPATTNATVSPPPPPVAFAPASPGNNGLSPGTLSGIIIGAVLGSVGMLIIGGIFFCFYRNWKRKRSQNNHSQPPQPKDDMAGSILQHWQDSVPPTTDGKVGLPPKPPPGGLVNQQQSSAGLPTPAVNSSNTSSSLGSDKAKPYKSLTPGISLALSQSTFTYDELAMATDGFSKSNLLGQGGFGYVHKGVLPNGKIVAVKQLKSESRQGEREFHAEVEVISRVHHRHLVSLVGYCISDSQKMLVYEYVQNNTLEFHLHGKDRPSMDWSTRMKIAVGSAKGLAYLHEDCNPKIIHRDIKASNILLDDSFEAKVADFGLAKFSSDTDTHVSTRVMGTFGYMAPDYATSGRLTKMSDVFSFGVVLLELITGRKPNDKNQPFKEGSMVEWARPFLYQALKNGNFDGLVDPKLQKTYILEEMIRMITCAAACVLNRPMFRPQMSQVRLALEGFFPLNDLKAGITPGPSNVSDYFNDGVQYNEDLRKTFMNMALGSKEPGISEYSGPSSKFGQHPSVSIPLGQQSTPGNGNGNGCGNLDSGQV 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00221 568 FunFam Proline-rich receptor-like protein kinase PERK8 175 278 - -
Pumo7g00221 568 MobiDBLite consensus disorder prediction 527 568 - -
Pumo7g00221 568 MobiDBLite consensus disorder prediction 9 52 - -
Pumo7g00221 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Pumo7g00221 568 ProSiteProfiles Protein kinase domain profile. 203 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00221 568 Pfam Protein tyrosine and serine/threonine kinase 206 472 IPR001245 GO:0004672|GO:0006468
Pumo7g00221 568 Gene3D Phosphorylase Kinase; domain 1 166 278 - -
Pumo7g00221 568 MobiDBLite consensus disorder prediction 143 172 - -
Pumo7g00221 568 MobiDBLite consensus disorder prediction 121 172 - -
Pumo7g00221 568 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 82 513 IPR047117 -
Pumo7g00221 568 SMART serkin_6 203 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00221 568 FunFam proline-rich receptor-like protein kinase PERK8 279 491 - -
Pumo7g00221 568 Gene3D Transferase(Phosphotransferase) domain 1 279 483 - -
Pumo7g00221 568 SUPERFAMILY Protein kinase-like (PK-like) 178 476 IPR011009 -
Pumo7g00221 568 MobiDBLite consensus disorder prediction 1 55 - -
Pumo7g00221 568 ProSitePatterns Protein kinases ATP-binding region signature. 209 231 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00221 Pumo-Chr7 2503790 2532722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00221 140 520 Trihelix Transcription Factor Family AT1G70460 58.268 6.88e-147 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pumo7g00221 PK_Tyr_Ser-Thr 5.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00221 - - gmx:100788350 771.926