Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00215 ATGAACCGGCAGGGGCAGAGATCCGGTGCGACGGGGGTGCACCATAACCGCCAGTACTCTGAACACTATCTCGACGCCTCTTCCAAGTGGTTTAACTCCTCCTCCAATCACATTCCTCCTCTTCAGGACTACAATTTGTACGGCGGCGGAGGAAGAATGTATCGGAACAACACGCAGAGGAGCTTCAATGAGTACTGTATGGATCCGTCCACGCCTCCTCGGAGTTACGCCGTTAAGAAAAACGGCAACGAAGACGATTCTCCTCGCGATTTCAGCCCTGGCCTCTTGGATCTCCATTCCTTCGATACAGAGCTTCTTCCTCAGATTACGTCCTTGAATGTGTATGATTCCGAGCCTTACATTTTCGGCAAACAAACTGTCAGAGCTCGCGCTTCTGAAAACAATGTCTCCAATAGTCTTGCTGCTGTGGACAATGTGAAATCTAGCAATGTGGCTAAGATTAAAGTTGTGGTTCGCAAGAGACCGCTTAATAAGAAGGAGATAGCTAAGCACGAGGAGGATATTATAGATACAGTTTCGAATTCTTTGACAGTGCACGAGACTAAACTTAAGGTTGACCTAACTCAGTATGTAGAAAAGCACGAATTTGTTTTTGATGCCGTTTTGAATGAAGAAGTTACAAATGATGAGGTGTATCGTGAAACAGTGGAGCCCATAGTTCCAATAATATTTCAACGCACTAAGGCAACTTGCTTTGCATATGGTCAAACAGGAAGTGGAAAAACTTACACAATGAAGCCACTGCCTCTTAAAGCATCAAGGGACATCTTGAGATTGATGCACCATACCTACAGGAATCAGGGATTTCAGTTGTTTGTGAGTTTCTTTGAAATATATGGTGGGAAGCTTTATGATCTCCTTAATGATCGAAAAAAACTGTGCATGAGGGAGGATGGTAAGCAACAAGTTTGCATTGTTGGTTTGCAAGAGTACCGAGTATCGGATGTAGAGACCATCAAGGAACTGATTGAGCAAGGAAATGCCACAAGAAGTACTGGCACCACAGGTGCAAATGAGGAGTCTTCACGGTCACATGCAATACTTCAGCTTGCTATCAAGAGATCAGTTGATGGAAATGTATCCAAGCCTCCTCGTGTTGTTGGGAAGCTTTCCTTCATAGATCTTGCTGGAAGCGAACGCGGAGCGGATACCACAGATAATGACAAACAGACAAGAATAGAAGGTGCTGAGATCAATAAGAGTTTGCTTGCCTTAAAGGAATGCATAAGAGCTTTAGATAATGACCAAGGACACATCCCATTCAGAGGCAGTAAATTGACTGAAGTTCTGAGAGATTCATTTGTTGGTGATTCCCGCACTGTTATGATATCATGCATATCACCAAGTTCGGGTTCATGCGAACATACTCTGAATACATTAAGATATGCTGACAGGGTAAAAAGCTTATCAAAAGGGAACAATTCTAAGAAGGATGTTTTATCTTCAAATTTTAACCTTAAAGAATCAACTACTATTCCCTTGTCTTCCGTTAATACATATACATACGAGGATCGCGCAGCTGATACATGGCCTGAAGAAAATGATGGGGATGAATTTAGTTCTCCTGAAGATTACTGTGAACCGGTGAAACCATCCTGGAAGAAAAATGGAAAGGTAGAGCCATATGGTGCAACAGATGACAAATTTAAGAAACCCAATGGTCAGATCAAATGGAAGGACATCCCAAAAGTTGAACCTAAAACAGTACGTCCAGATGATGATTTGAATGCCCTCTTACAGGAAGAAGAAGATCTTGTAAATGCTCACCGGAAACAAGTAGAGGAGACCATGAATATTGTTAGAGAGGAAATGAACCTGTTGGTTGAAGCAGACAAACCAGGTAATCAGCTGGATGATTATATAGCAAAACTAAATGCCATTCTGTCTCAGAAGGCTGCTGGCATCATGCAGTTACAAACCCGTTTAGCTCATTTCCAGAAACGTTTAAAGGAGCATAACGTTTTGGCTTCATCTGCTGGTTACTAA 2007 0.4255 MNRQGQRSGATGVHHNRQYSEHYLDASSKWFNSSSNHIPPLQDYNLYGGGGRMYRNNTQRSFNEYCMDPSTPPRSYAVKKNGNEDDSPRDFSPGLLDLHSFDTELLPQITSLNVYDSEPYIFGKQTVRARASENNVSNSLAAVDNVKSSNVAKIKVVVRKRPLNKKEIAKHEEDIIDTVSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLYDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVETIKELIEQGNATRSTGTTGANEESSRSHAILQLAIKRSVDGNVSKPPRVVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSNFNLKESTTIPLSSVNTYTYEDRAADTWPEENDGDEFSSPEDYCEPVKPSWKKNGKVEPYGATDDKFKKPNGQIKWKDIPKVEPKTVRPDDDLNALLQEEEDLVNAHRKQVEETMNIVREEMNLLVEADKPGNQLDDYIAKLNAILSQKAAGIMQLQTRLAHFQKRLKEHNVLASSAGY 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00215 668 Gene3D Kinesin motor domain 126 479 IPR036961 -
Pumo7g00215 668 Pfam Kinesin motor domain 159 475 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo7g00215 668 SMART kinesin_4 151 482 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo7g00215 668 Coils Coil 586 617 - -
Pumo7g00215 668 ProSitePatterns Kinesin motor domain signature. 375 386 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo7g00215 668 ProSiteProfiles Kinesin motor domain profile. 153 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo7g00215 668 CDD KISc_KIF2_like 153 474 - -
Pumo7g00215 668 PANTHER KINESIN-RELATED PROTEIN 6 58 519 IPR027640 GO:0003777|GO:0007018
Pumo7g00215 668 PRINTS Kinesin heavy chain signature 376 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo7g00215 668 PRINTS Kinesin heavy chain signature 342 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo7g00215 668 PRINTS Kinesin heavy chain signature 233 254 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo7g00215 668 PRINTS Kinesin heavy chain signature 426 447 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo7g00215 668 FunFam Kinesin-like protein 132 479 - -
Pumo7g00215 668 MobiDBLite consensus disorder prediction 68 90 - -
Pumo7g00215 668 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 476 IPR027417 -
Pumo7g00215 668 MobiDBLite consensus disorder prediction 516 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00215 Pumo-Chr7 2464136 2469533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00215 152 476 Calmodulin-binding Proteins AT5G65930 33.731 1.49e-44 170