Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00214 ATGACCAATACCTCAGGTGCCACGGAACAATTTGACAAATGCACGAAGAAACGAGTTGCAGGGGTTTCGCATTCATTTCAATCCTACAAAAAGGACAATATTCCGTGCAAAATCGACGAGGGTCTCTATTTGGGTTCGATTGCCGCTGCAGCTAACAAGGTTGCTTTGAAAAACTATAATATCACTCACATTTTGACTGTGGCTGGTAGAATACCACCTGCACATCCTGGGAATTTTGTTTATAAAATTATAAACGTTGTTGACAGAGATGATGAAGACTTAAAACAATACTTCAGTGAATGTTTTGATTTTATCAATGAGGCCAAAAGACACGGTGGAAGTGTTTTGGTTCACTGTTATGCTGGAATATCAAGGAGAATTGGTCCTAATATTGTTACACCTTCCAGTGTGACTATAGTTGTGGCATATCTGATGAAGACTCGTGGAATGAGCTTTTTTGAAGCTTTGAAACATGTAAGGAGCATACGACCAGTAGCATGTCCCAATTCGGGTTTCTCTTCTCAGCTGAAGAACTTTCAAGAGTCTCTTCAAGAGACGCCAACATCAACCTCTGACTCCCCGCATGCCTTCCTCGTCCTTGCCAACGCTGCCTTCCTCCTTATTGCTTGCATTGCTTGGAAGTTTTTTATGATGTTGATTTCAAGTTGA 669 0.4126 MTNTSGATEQFDKCTKKRVAGVSHSFQSYKKDNIPCKIDEGLYLGSIAAAANKVALKNYNITHILTVAGRIPPAHPGNFVYKIINVVDRDDEDLKQYFSECFDFINEAKRHGGSVLVHCYAGISRRIGPNIVTPSSVTIVVAYLMKTRGMSFFEALKHVRSIRPVACPNSGFSSQLKNFQESLQETPTSTSDSPHAFLVLANAAFLLIACIAWKFFMMLISS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00214 222 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 31 185 IPR029021 -
Pumo7g00214 222 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 31 193 - -
Pumo7g00214 222 SMART dsp_5 34 182 IPR020422 GO:0006470|GO:0008138
Pumo7g00214 222 CDD DSP 35 178 - -
Pumo7g00214 222 Gene3D Protein tyrosine phosphatase superfamily 27 193 IPR029021 -
Pumo7g00214 222 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 96 164 IPR000387 GO:0016311|GO:0016791
Pumo7g00214 222 Pfam Dual specificity phosphatase, catalytic domain 42 181 IPR000340 GO:0008138|GO:0016311
Pumo7g00214 222 FunFam Dual specificity phosphatase 12 36 196 - -
Pumo7g00214 222 ProSiteProfiles Dual specificity protein phosphatase domain profile. 34 185 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00214 Pumo-Chr7 2456607 2458309 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00214 37 184 Protein tyrosine phosphatase (PTP) family AT3G06110 53.378 1.79e-49 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00214 - - gmx:100306342 268.47