Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00213 ATGGATTTCTGGCCAGAATTTCTTGCAAGCAATTCGGGAAGAGAGTTTGTAGCAGGTGGCTTTGGAGGCATTGCTGGTGTATTTTCAGGTTATCCACTTGACACTCTTCGCATCAGATTACAGAACTCAAAAAATGGCTCTGCCTTCACAATCCTTAGACAAATGGTGTCTAGGGAAGGACCAACTTCTTTGTACCGTGGCATGGGCGCACCATTAGCCTCCGTTACTTTTCAGAATGCAATGGTTTTCCAAACATACGCAGTTATGGCAAGGGCATTTGACTCATCTGTTTGTGCTAAAGACCCTCCTTCCTACAAGGGTGTTGCTTTAGGAGGAACGGGTACCGGGGCTCTCCAAAGTCTATTAATATCCCCTGTAGAGTTGATCAAAATTCGACTTCAGCTGCAGAACGAAGGCCAGGTGACAGAATCTGCAAAAGGTCCTGTAAGACTTGCCAAAAATATATGGAGAAAAGAAGGCCTTCGAGGCATCTATCGAGGTCTTGGTGTCACAGTGTTGAGGGATGGACCTTCTCATGGTTTATACTTCTGGACATATGAGTATATGAGGGAACAACTTCACCCTGGATGCAGAAAAAGTGGTGAAGAGAGTTTGGATACTATGTTAATATCAGGAGGATTAGCTGGGGTGACGAGTTGGATTAGTTGCTACCCTTTGGATGTTGTAAAGACAAGACTACAGGCTCAAACACCCTCTTCTCTCAAGTACAAAGGCATTATAGATTGTTTCAAAAAGAGTGTTAACGAAGAAGGATACGGTGTGCTATGGCGGGGTTTAGGAACTACAGTTGCCAGAGCGTTCGTGGTAAATGGTGCCATATTTGCTGCTTACGAGGTTTCACTAAGATTACTGTTTAACAATGGAAGTATTCAGATGCAGGAAACAATTTAG 912 0.4386 MDFWPEFLASNSGREFVAGGFGGIAGVFSGYPLDTLRIRLQNSKNGSAFTILRQMVSREGPTSLYRGMGAPLASVTFQNAMVFQTYAVMARAFDSSVCAKDPPSYKGVALGGTGTGALQSLLISPVELIKIRLQLQNEGQVTESAKGPVRLAKNIWRKEGLRGIYRGLGVTVLRDGPSHGLYFWTYEYMREQLHPGCRKSGEESLDTMLISGGLAGVTSWISCYPLDVVKTRLQAQTPSSLKYKGIIDCFKKSVNEEGYGVLWRGLGTTVARAFVVNGAIFAAYEVSLRLLFNNGSIQMQETI 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00213 303 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Pumo7g00213 303 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Pumo7g00213 303 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Pumo7g00213 303 PRINTS Mitochondrial carrier protein signature 165 183 IPR002067 GO:0055085
Pumo7g00213 303 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Pumo7g00213 303 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 11 291 - -
Pumo7g00213 303 SUPERFAMILY Mitochondrial carrier 14 285 IPR023395 -
Pumo7g00213 303 FunFam Mitochondrial arginine transporter BAC2 11 301 - -
Pumo7g00213 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
Pumo7g00213 303 Gene3D Mitochondrial carrier domain 13 301 IPR023395 -
Pumo7g00213 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
Pumo7g00213 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Pumo7g00213 303 Pfam Mitochondrial carrier protein 13 93 IPR018108 -
Pumo7g00213 303 Pfam Mitochondrial carrier protein 110 193 IPR018108 -
Pumo7g00213 303 Pfam Mitochondrial carrier protein 208 294 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00213 Pumo-Chr7 2453595 2456515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00213 1 294 Antiporters AT1G79900 71.525 1.98e-147 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00213 K15109 - gmx:100812056 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00213 7 2453595 2456515 Pumo7g00213 7 2453595 2456515 ECH