Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00206 ATGGATCCCAAACTAAAAATCTCATCAAAGAAGATCCCAAAATCCCTTCGAGACTACCTCTCCAAGATCAAAACCCCCCAACGTACCCAAATCCGATTACCCTCCAAGAAATGGATCCTCACCGGGTGCAAGCATCCTAGGACTCCTTCTCTCGACATAGACAACATGAAAAACACCAACACCAACAACAACAACGTCAAAGACGACGAAGCCATGTTAGCGGACATCGACCGTTTCCTCTTTGAAAATTTCAAGTCCCTATTCCTTGATGACCGTGAAGAAACCGCCAACAACAATAACCGCAAAGAAGAAAAGTCTCTCAATCTGGGCCCCATCAGGTTTGACTCTTCCAGAAGGTTCGAGGAATCGCCACTCAACCTCTTCACGGACACAACCACCGAAGCCGGATCAAGCTCCGCCATGTCCGAAAGCGAGGTCGCGGAGGAGCACACGGTGGTTCCGAGTAACTGCGTGGTGGTGCTGGCCAATTCGGTGAACCCCAGCCAGGATTTCCGGCAATCCATGGAAGGCGTGGTGGAAGCAAGATTGAATAACGGTGAAAAGGTGGATTGGGACTTTATGGAGGAGCTTTTGTTCTGTCACGTGAACCTGAACCAGAAGAAGTCGCACAAGTTCATTCTGAGCGCCTTCGTGGACGTGGTGACCGCCATGCGCCGCCCACCGGAGATTGCTCCGGCGAAGCCCAGGCCGCCGCGGAGCGTTCGAACGGTCAGGATCGGAAGGGAGGTGCGGAAGAAGACAAAGGAAGCAGTTACCTTGGAATTTGGGTCGCCGTAA 798 0.5213 MDPKLKISSKKIPKSLRDYLSKIKTPQRTQIRLPSKKWILTGCKHPRTPSLDIDNMKNTNTNNNNVKDDEAMLADIDRFLFENFKSLFLDDREETANNNNRKEEKSLNLGPIRFDSSRRFEESPLNLFTDTTTEAGSSSAMSESEVAEEHTVVPSNCVVVLANSVNPSQDFRQSMEGVVEARLNNGEKVDWDFMEELLFCHVNLNQKKSHKFILSAFVDVVTAMRRPPEIAPAKPRPPRSVRTVRIGREVRKKTKEAVTLEFGSP 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00206 265 NCBIfam uncharacterized plant-specific domain TIGR01568 158 224 IPR006458 -
Pumo7g00206 265 Pfam Transcriptional repressor, ovate 164 224 IPR006458 -
Pumo7g00206 265 ProSiteProfiles OVATE domain profile. 160 223 IPR006458 -
Pumo7g00206 265 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 67 223 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00206 Pumo-Chr7 2353666 2354699 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo7g00206 Ovate 5.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00206 - - gmx:100777653 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00206 7 2353666 2354699 Pumo7g00206 7 2353666 2354699 ECH
Pumo4g04250 4 83420185 83421244 Pumo7g00206 7 2353666 2354699 PCT