Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00205 ATGAGCGTGGTGGGTTTCGATTTCGGTAACGAGAGTTGCATTGTCGCGGTTGCCAGGCAGAGAGGGATCGACGTTGTGCTCAATGATGAGTCGAAGCGTGAAACGCCCGCTATTGTGTGCTTTGGTGACAAGCAACGCTTCATTGGCACTGCTGGTGCTGCCTCCACTATGATGAACCCTAAGAATTCAATCTCACAGATTAAGAGACTCATTGGTAGGAAATTCTCTGATCCTGAATTGCAACGGGATCTTAATTCATTGCCGTTTCTGGTCACCGAGGGGAATGATGGTTACCCATTGATTCATGCACGATACTTGGGTGAGGCTAAGACGTTTACGCCTACCCAAGTGTTTGGAATGATGTTGTCGAATCTTAAGGAAATAGCAGAGAAAAATCTCACTGCAGTGGTTGTTGATTGTTGCATTGGAATCCCGGTTTATTTTACTGATCTGCAGAGAAGGGCGGTGTTGGATGCGGCCACGATTGCTGGTCTACACCCGCTTCAGTTAATTCATGAAATGACTGCCACTGCCTTGGCCTATGGGATATATAAAACTGACCTTCCTGAGAATGATCAATTGAATGTTGCATTTGTTGATGTTGGCCATGCTAGCATGCAAGTGTGCATTGCTGGATTCAAGAAGGGGCAGCTGAAAGTGTTGGCTCATTCGTATGATAGGTCCCTGGGCGGTAGGGATTTTGACGAGGTTTTGTTCCATCATTTTGCTGGGAAGTTTAAGGAGGAGTACAAAATTGATGTTTTCCAGAATGCTAGGGCTTGCATAAGGCTCAGGGCTGCCTGTGAGAAGATGAAGAAGATGCTTAGTGCAAATCCCGAGGCACCCCTCAACATTGAGTGCTTGATGGATGAGAAGGATGTCCGTGGCTTCATCAAGCGGGATGAATTTGAGCAACTAAGTCTTCCAATTTTGGAACGTGTGAAGGGACCTCTGGAGAAGGCACTTGCTGAAGCAGGGCTCACCATTGAAAATGTACACATGGTTGAGGTGGTTGGTTCAGGTTCTCGTGTACCGGCCGTTAACAAAATATTGACAGAGTTTTTCAAAAAGGAGCCTAGGCGGACAATGAATGCTAGTGAGTGTGTTGCTAGGGGCTGTGCGTTGGAATGTGCAATTCTTAGTCCAACGTTTAAAGTACGAGAATTTCAGGTCAACGAAAGCCTTCCTTTCTCGATTTCTCTTTCATGGAAAGGTTCTGGTCCAGATGCACAGGACAATGGACCAGAAAATCAGCAGAGTTCCCTTGTTTTTCCCAAGGGTAATCCCATACCAAGTATCAAGGCACTGACATTCTACAGGGCAGGAACATTTTCTGTTGATGTACAATATGGTGATGCAAGTGGGCTGCAAACGCCTGCTAAGATCAGCACATATACTATTGGTCCTTTCCAAACTACAAATGGTGAAAGGGCAAAAGTTAAAGTGAAAGTTCGTTTGAATCTGCACGGAATTGTATCCCTTGAGTCTGCAACGCTCCTGGAAGAGGAAGAAGTTGAGGTTCCAGTTACCAAAGAAGCAGCAGGGGAAAATACTAAGATGGACATTGATGAAGTCCCAGCTGAGGCTGCTGCACCTCCCACCTCCAATGACACTGGTGCTAATATGGAAGATGCAAAGGCTAGTACTGATGCCTCTGGGGTTGAAAATGGCGTCCCTGAGAGTGGAGATAAGTCTTTGCAAACAGATACTGATACCAAGGCTCCAAAGAAAAAGGTCAAGAAAACAAACATTCCTGTAGCAGAGTTAGTTTATGGAGCAATGGTGCCTGTGGATGTCCAGAAAGCAGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAAGAAACAAAAGACAAGAAAAACGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCACTGCTTCAGAGAGAGATGATTTTATTGCCAAACTTCAGGAAGTGGAAGATTGGCTTTATGATGAGGGTGAAGATGAAACTAAAGGTGTATATATTGCCAAGCTTGAAGAACTCAAAAAGCAAGGTGATCCAATTGAATGGCGCTACAAAGAATTCATGGAGAGGGGTACTATAATTGAACAGTTCATCTATTGTATAAATAGTTACAGACAAGTTGCAATGTCGAATGATCCCAGATTTGAACACATTGACATTAATGAGAAACAGAAGGTCTTAAATGAATGTGCTGAAGCTGAGAACTGGTTTAAGGAGAAGCAGCAGCAGCAGAACTCACTTCCAAAATATGCCAACCCTGTACTCTTGTCAGCTGAAATAAGAAAGAAAGCTGAAGCTGTCGATAGGTTCTGCAAGCCGATTATGACAACACCAAGGCCAACCAAGTCGGCTACTCCACCAGGACCAGCAACCCCATCTTCTCAGAGTGATGAGCAGCAGCAAACTCAGGGGGATGCTGATGCCAACAGTAATGACAATGCTGGGGATAGCGGTAGTCAGGCTGCACCAGCGTCTGCGGAACCAATGGAGACTGATAAGTCTGAGAACGCAGGCTCTGCCTAA 2553 0.4501 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGRKFSDPELQRDLNSLPFLVTEGNDGYPLIHARYLGEAKTFTPTQVFGMMLSNLKEIAEKNLTAVVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLQLIHEMTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLAHSYDRSLGGRDFDEVLFHHFAGKFKEEYKIDVFQNARACIRLRAACEKMKKMLSANPEAPLNIECLMDEKDVRGFIKRDEFEQLSLPILERVKGPLEKALAEAGLTIENVHMVEVVGSGSRVPAVNKILTEFFKKEPRRTMNASECVARGCALECAILSPTFKVREFQVNESLPFSISLSWKGSGPDAQDNGPENQQSSLVFPKGNPIPSIKALTFYRAGTFSVDVQYGDASGLQTPAKISTYTIGPFQTTNGERAKVKVKVRLNLHGIVSLESATLLEEEEVEVPVTKEAAGENTKMDIDEVPAEAAAPPTSNDTGANMEDAKASTDASGVENGVPESGDKSLQTDTDTKAPKKKVKKTNIPVAELVYGAMVPVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVTASERDDFIAKLQEVEDWLYDEGEDETKGVYIAKLEELKKQGDPIEWRYKEFMERGTIIEQFIYCINSYRQVAMSNDPRFEHIDINEKQKVLNECAEAENWFKEKQQQQNSLPKYANPVLLSAEIRKKAEAVDRFCKPIMTTPRPTKSATPPGPATPSSQSDEQQQTQGDADANSNDNAGDSGSQAAPASAEPMETDKSENAGSA 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00205 850 FunFam Heat shock 70 kDa protein 4 230 313 - -
Pumo7g00205 850 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Pumo7g00205 850 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Pumo7g00205 850 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Pumo7g00205 850 FunFam Heat shock 70 kDa protein 4 38 113 - -
Pumo7g00205 850 CDD HSPA4_like_NDB 2 381 - -
Pumo7g00205 850 FunFam Heat shock 70 kDa protein 4 1 79 - -
Pumo7g00205 850 FunFam Heat shock 70 kDa protein 4 594 704 - -
Pumo7g00205 850 MobiDBLite consensus disorder prediction 529 577 - -
Pumo7g00205 850 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 627 IPR029047 -
Pumo7g00205 850 Gene3D - 38 113 - -
Pumo7g00205 850 FunFam Heat shock 70 kDa protein 14 387 592 - -
Pumo7g00205 850 Pfam Hsp70 protein 3 693 IPR013126 GO:0005524|GO:0140662
Pumo7g00205 850 FunFam Heat shock 70 kDa protein 4 108 207 - -
Pumo7g00205 850 Gene3D Actin; Chain A, domain 4 230 313 - -
Pumo7g00205 850 Gene3D - 596 705 IPR029048 -
Pumo7g00205 850 PANTHER HSC70CB, ISOFORM G-RELATED 1 842 - -
Pumo7g00205 850 MobiDBLite consensus disorder prediction 781 850 - -
Pumo7g00205 850 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 591 IPR029047 -
Pumo7g00205 850 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 597 693 IPR029048 -
Pumo7g00205 850 MobiDBLite consensus disorder prediction 798 830 - -
Pumo7g00205 850 Gene3D - 5 374 - -
Pumo7g00205 850 Gene3D - 186 360 - -
Pumo7g00205 850 PRINTS 70kDa heat shock protein signature 140 160 - -
Pumo7g00205 850 PRINTS 70kDa heat shock protein signature 30 42 - -
Pumo7g00205 850 PRINTS 70kDa heat shock protein signature 332 348 - -
Pumo7g00205 850 PRINTS 70kDa heat shock protein signature 363 383 - -
Pumo7g00205 850 PRINTS 70kDa heat shock protein signature 2 15 - -
Pumo7g00205 850 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 711 791 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00205 Pumo-Chr7 2332048 2337791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00205 4 664 Calmodulin-binding Proteins AT1G16030 28.872 3.25e-85 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00205 K09489 - gmx:100816539 1535.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00205 7 2332048 2337791 Pumo7g00205 7 2332048 2337791 ECH
Pumo4g04253 4 83446244 83450111 Pumo7g00205 7 2332048 2337791 PCT