LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo7g00202	ATGATTCATAATGGTTGCATTGTATCCCAAGGGTGTGCCCCTGTGAATTCTAGGTCACGCAACCATGCCATACCTAGTAGCTCTCTCTTTCGTTGTGCATCTCGAATGCCTCCTAAGGTTGCCGTCTCAAACATCCGGAGCTTTTGGGGACATAATCTGGAATGTAAATCCTCGTTGCCTAGAGGAACGACATTGTCAAACATGTTTGCTGCATCAAGCCTACGTGTAAGTGAGGGTCAAAATCTTCTCTTTCACACTTTCCCTGTGTTGCCCCGGTTGCGCAAGTCTAATATGGCCCCTCGGGCATCAAAGGATGTCCCAACCAGCTTCCGTTATCCTCCAATGACCAAAAAACCGCAATGGTGGTGGAGATCATTAGCATGCCTCCCTTACCTGATGCCTCTCCATGAGACATGGATGTATGCTGAGACAGCATACAATCTTCACCCGTTTTTGGAATGCTTTGAATTCTATACATACCCTTTTCTTATGGCAATTGGGAGCCTGCCTAGCTGGTTTCTCATGGCATACTTCTTTGTTGCATATCTTGGAATTGTGAGGAGAAAAGAATGGCCTCATTTCTTCAGATTTCATGTTGTGATGGGAATGTTATTGGAGATTGCCCTGCAGGTTATAGGGACTGTGAGCCGTTGGATGCCGCTATCACTCTACTGGGGTAAACTGGGAATGCATTTCTGGACTGCCATATCATTTGGTTATCTATTTACTGTCTTGGAGTGCATAAGGTGTGCCCTTGTCGGATTGTGGATGGGTGTGGGCAATATGTGCAGACTTTTCTTTGGAATAACATCGTGCCTTATGCCTCATAGATTCTTCCCATTCAACTGGTGA	852	0.4577	MIHNGCIVSQGCAPVNSRSRNHAIPSSSLFRCASRMPPKVAVSNIRSFWGHNLECKSSLPRGTTLSNMFAASSLRVSEGQNLLFHTFPVLPRLRKSNMAPRASKDVPTSFRYPPMTKKPQWWWRSLACLPYLMPLHETWMYAETAYNLHPFLECFEFYTYPFLMAIGSLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLSLYWGKLGMHFWTAISFGYLFTVLECIRCALVGLWMGVGNMCRLFFGITSCLMPHRFFPFNW	283

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo7g00202	283	NCBIfam	Tic20 family chloroplast protein importer	1	263	IPR005691	-
	Pumo7g00202	283	Pfam	Chloroplast import apparatus Tic20-like	93	256	IPR005691	-
	Pumo7g00202	283	PANTHER	PROTEIN TIC 20-II, CHLOROPLASTIC	25	256	IPR005691	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo7g00202	Pumo-Chr7	2291745	2294156	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo7g00202	60	259	Chloroplast and Mitochondria Gene Families	AT4G03320	39.216	9.29e-42	143

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo7g00202	-		-	gmx:100818669	505.753