Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00194 ATGCTTTGCTTTCTCATGATTTGGTCTTTTTGTTGCAGGATTCACACAGCAAGATTGTACTTCTTCCTGCTGTTCAGAATAATTGCAGAAATGAAGAAAGAAAACAGTGTTACGCTGAAAGCTGGGGAGCTCCCTGGTCGATTGACTCGTGCTCGTGCTGCTGCTGCTCTTCGCGCATCTGGACGGCTACCCCCTTTGAAAGAGAGAGCACAGCAAAATCAGAATCAGTTATCCAGAGTCAATTCAAAAAGAGCAGCTTCTGATAATAATACATGTGTTCCGCGTAAAAAGAGGGCTGTTCTTCAGGAAGTTACTAATGTTTGCTGTGAAAATGCATACAAGGGTTGTTTCAACTCAACTAAAATTCAGGCTAAGAAAAGCAAGCAGGTTAAGGCTGGTCAAATTAATGTGTCCAAAGTGGCTCCTTCTGTTACTGTGGAGCAACTACTATTTCAAGCTAACTCCAAAACAAAGGAAACAGCATTGAAATCAGAAGATACTATGTGCTCAATTAATTTGGAAAACAATGAACTTCTACGACCGAGTGCCAATGATTGTAGCAAGGACTTTAGATTGCCTGAAAGTCATATGTCTGGAATATCTGCTCATCCTTTGATTTCTCAGAAGAAAGACAAGAAAGATAACCTTTCAAAACTTTTGACTGCATTGAAGGATACAGACATCACCAATATAGATGATAATCTTGAAGATCCTCAATTGTGCAGCCTCTATGCTGCTGATATCTATGACAACCTGCGTGTTGCTGAGCTTGCAAGAAGGCCTTATCCAAACTTTATGGAGACAGTGCAGCGAGATATTACTCAAAGCATGCGTGGGATACTGGTTGATTGGCTTGTAGAGGTTTCTGAGGAATACAAATTGGTTGCAGACACTCTTGACCTCACTGTGTATCTCATAGATTGGTTTCTCTCCAAAAATTACATTGAAAGACAAAGACTTCAACTACTTGGCATCACCTGCATGCTAATTGCCTCGAAGTACGAAGAAATTAATGCCCCGCGTATTGAAGATTTCTGCTTCATCACAGACAATACATACACGAAAGCTGAGGTACTAAAAATGGAGAGTCAAGTGTTAAAGTCGTCTGAATATCAATTGTTTGCTCCCACTATACAACCTTTCCTCAGGAGGTTTCTTCGGGCAGCACAAGCTTCATACAAGGACCCCTGCCTTGAATTGGAGTACCTGGCCAATTACCTAGCTGAACTAACACTGATGGACTATGGTTTCTTGAATTTCCTTCCCTCTATCATTGCTGCATCAGCTGTATTTCTTGCCAGGTGGACACTAGATCAGTCAATCCACCCATGGAATCCAACTCTTCAACACTATGCTTGTTACAAAGCATCAGATTTGAAAACCACAGTTCTTGCATTACAAGACCTACAGCTGAATACTGATGGCTGCCCTCTTGCTGCTGTCCGCACAAAATACAGACAAGACAAGTTTAAATGTGTAGCGGCTTTGTCTTCACCAAAACTGCTTGAAACTTTGTTCTGA 1521 0.4142 MLCFLMIWSFCCRIHTARLYFFLLFRIIAEMKKENSVTLKAGELPGRLTRARAAAALRASGRLPPLKERAQQNQNQLSRVNSKRAASDNNTCVPRKKRAVLQEVTNVCCENAYKGCFNSTKIQAKKSKQVKAGQINVSKVAPSVTVEQLLFQANSKTKETALKSEDTMCSINLENNELLRPSANDCSKDFRLPESHMSGISAHPLISQKKDKKDNLSKLLTALKDTDITNIDDNLEDPQLCSLYAADIYDNLRVAELARRPYPNFMETVQRDITQSMRGILVDWLVEVSEEYKLVADTLDLTVYLIDWFLSKNYIERQRLQLLGITCMLIASKYEEINAPRIEDFCFITDNTYTKAEVLKMESQVLKSSEYQLFAPTIQPFLRRFLRAAQASYKDPCLELEYLANYLAELTLMDYGFLNFLPSIIAASAVFLARWTLDQSIHPWNPTLQHYACYKASDLKTTVLALQDLQLNTDGCPLAAVRTKYRQDKFKCVAALSSPKLLETLF 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00194 506 CDD CYCLIN_AtCycA-like_rpt2 376 490 - -
Pumo7g00194 506 Pfam Cyclin, N-terminal domain 247 372 IPR006671 -
Pumo7g00194 506 Coils Coil 206 226 - -
Pumo7g00194 506 Gene3D - 247 495 - -
Pumo7g00194 506 FunFam Cyclin A1 363 495 - -
Pumo7g00194 506 SUPERFAMILY Cyclin-like 236 372 IPR036915 -
Pumo7g00194 506 MobiDBLite consensus disorder prediction 67 89 - -
Pumo7g00194 506 Gene3D - 261 374 - -
Pumo7g00194 506 Pfam Cyclin, C-terminal domain 376 498 IPR004367 -
Pumo7g00194 506 SUPERFAMILY Cyclin-like 376 501 IPR036915 -
Pumo7g00194 506 SMART cyclin_7 380 468 IPR013763 -
Pumo7g00194 506 SMART cyclin_7 283 367 IPR013763 -
Pumo7g00194 506 PANTHER CYCLINS 195 487 IPR039361 -
Pumo7g00194 506 FunFam Mitotic cyclin 6 261 361 - -
Pumo7g00194 506 MobiDBLite consensus disorder prediction 65 89 - -
Pumo7g00194 506 SMART Cyclin_C_2 376 499 IPR004367 -
Pumo7g00194 506 CDD CYCLIN_AtCycA_like_rpt1 237 372 - -
Pumo7g00194 506 PIRSF Cyclin_A_B_D_E 51 505 IPR046965 GO:0016538|GO:0044772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00194 Pumo-Chr7 2200001 2205361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00194 31 506 Core Cell Cycle Gene Families AT1G80370 53.608 1.41e-172 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00194 K06627 - gmx:100789757 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00194 7 2200001 2205361 Pumo7g00194 7 2200001 2205361 ECH