Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00157 ATGGCGCAAATTCTGCTTCATGGGACTCTCCACGCCACCATCTTCGAGGTTGATAGGCTCAATGCTGGTGGTGGTGGTGGCAATTTTTTAAGCAAGCTCAGGCAAAACTTTGAGGAGACTGTTGGTATTGGAAAGGGAGTTACTAAACTCTATGCAACCATTGATCTGGAGAAAGCAAGAGTAGGAAGAACTAGAATCATAGAAAATGAACATACTAATCCCAGATGGTATGAGTCTTTTCACATTTATTGTGCCCATATGGCTTCAAATATTATATTCACTGTGAAAGATGATAATCCTATTGGGGCAACTTTAATTGGAAGAGCTTATGTGCCTGTTTCGGAGGTCTTGGATGGTGAGGAAATAGATAGGTGGGTTGAAATCTTGGATGCGGAAAAAAATCCAATACATGAGGGTTCAAAGATCCATGTGAAGCTGCAATATTTTGATGTCACAAAAGACCGCAACTGGGCTCGAGGCATTAGAAGTCCTAAATTCCCTGGAGTTCCCTATACTTTCTTCTCACAGAGGCAAGGATGTAAGGTATCTCTGTACCAAGATGCTCATGTACCTGATAATTTTGTACCTAAAATACCTCTTGCTGGAGGCAAGAATTATGAGGCTCATAGGTGTTGGGAGGATATATTTGATGCAATCACTGATGCTAAACATTTCATATACATTACTGGTTGGTCTGTTTATACTGAAATTTCCTTGGTGAGGGATTCTAGGAGGCCAAAGCCTGGGGGAGACCAAACACTTGGTGAGCTTCTCAAGAAAAAGGCAAGTGAAGGTGTTAAGGTATTGATGCTTGTTTGGGATGATAGAACATCAGTTGGTTTGTTGAAAAAAGATGGACTGATGGCTACTCACGATGAAGAAACCGCGCAGTTCTTCAGTGACACTGAGGTGCATTGTGTTTTATGCCCCCGCAATCCTGATGATGGTGGTAGTATTGTTCAGGATTTACAAATTTCTACCATGTTTACTCATCACCAGAAGATTGTGGTGGTTGACGGTGCAATGCCAGGTGTAGGGTCAGACAAGCGAAGAGTTGTGAGTTTTGTTGGGGGTATTGACCTCTGCGATGGAAGATATGACACTGCCTTCCACTCACTTTTCAGAACCCTAGACACAGCACACCACGACGATTTTCATCAGCCTAACTTTCCTGGTGCTGCAATCACAAAAGGTGGTCCCAGGGAACCTTGGCATGACATCCACTCCCGGCTCGAAGGACCCATAGCTTGGGATGTTTTGTTCAACTTTGAGCAGAGATGGAGAAAGCAAGGTGGGAAGGATGTACTTGTTCCACTGAGAGAGCTTGAAGATGTCATTATTCCCCCATCCCCAGTAACGTTTCCTGAAGATCATGAGACATGGAATGTTCAGTTATTTAGATCTATTGATGGTGGGGCTGCTTTTGGGTTCCCAGATACTCCTGAAGATGCTGCCAGAGCTGGGCTTATTAGTGGGAAGGATAATATCATTGATCGTAGCATTCAAGATGCTTATATTAATGCTATTCGACGCGCAAAGGATTTCATTTATATTGAAAATCAGTATTTCCTTGGAAGCTCTTTTGCCTGGAGTGCTGATGATATTAAGCCTGAAGACATTGGTGCTTTGCATCTAATCCCAAAGGAACTTTCACTTAAGATTGTTAGTAAGATTGAAGCTGGGGAAAGGTTCGCTGTGTATGTTGTAGTCCCAATGTGGCCAGAGGGAATCCCAGAAAGTGCATCAGTTCAGGCAATATTGGACTGGCAGAAGAGAACAATGGAGATGATGTACAAGGACGTTATTCAGGCACTCAGAGCCAAGGGAATCGAGGAAGATCCTCGAAACTATTTGACATTCTTCTGCCTTGGCAATAGGGAAGTGAAGAAATCAGGAGAATATGAGCCTGCTGAACAACCAGATCCTGATTCAGATTATCAGAGAGCCCAAGAGGCCCGACGTTTCATGATTTATGTTCATACCAAGATGATGATAGTTGACGACGAATACATAATCATTGGATCTGCCAACATCAACCAAAGGTCAATGGATGGTGCTAGGGACTCTGAGATTGCCATGGGTGCTTATCAGCCGTATCATCTGGCTAACAGGCAGCCGGCTCGGGGCCAGATCCACGGTTTCCGCATGTCATTGTGGTATGAGCACCTTGGCATGCTTGATGACTCCTTCTTCCAGCCAGAAAGTGAAGAATGCATTAATAAGGTGAACCAGATTGCTGACAAATATTGGGATCTGTACTCTAGTGAGTCACTTGAGCATGACCTCCCCGGTCACCTTCTCCGCTACCCCATCGGGGTTGCCAGTGAAGGAGATGTCACTGAGCTGCCAGGATTTGAATTCTTCCCTGACACCAAGGCTCGCATTCTTGGTGGCAAAGCTGACTACCTCCCCCCTATCCTCACTACTTAG 2430 0.4453 MAQILLHGTLHATIFEVDRLNAGGGGGNFLSKLRQNFEETVGIGKGVTKLYATIDLEKARVGRTRIIENEHTNPRWYESFHIYCAHMASNIIFTVKDDNPIGATLIGRAYVPVSEVLDGEEIDRWVEILDAEKNPIHEGSKIHVKLQYFDVTKDRNWARGIRSPKFPGVPYTFFSQRQGCKVSLYQDAHVPDNFVPKIPLAGGKNYEAHRCWEDIFDAITDAKHFIYITGWSVYTEISLVRDSRRPKPGGDQTLGELLKKKASEGVKVLMLVWDDRTSVGLLKKDGLMATHDEETAQFFSDTEVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDGAMPGVGSDKRRVVSFVGGIDLCDGRYDTAFHSLFRTLDTAHHDDFHQPNFPGAAITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDVLVPLRELEDVIIPPSPVTFPEDHETWNVQLFRSIDGGAAFGFPDTPEDAARAGLISGKDNIIDRSIQDAYINAIRRAKDFIYIENQYFLGSSFAWSADDIKPEDIGALHLIPKELSLKIVSKIEAGERFAVYVVVPMWPEGIPESASVQAILDWQKRTMEMMYKDVIQALRAKGIEEDPRNYLTFFCLGNREVKKSGEYEPAEQPDPDSDYQRAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLANRQPARGQIHGFRMSLWYEHLGMLDDSFFQPESEECINKVNQIADKYWDLYSSESLEHDLPGHLLRYPIGVASEGDVTELPGFEFFPDTKARILGGKADYLPPILTT 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00157 809 Gene3D C2 domain 7 159 IPR035892 -
Pumo7g00157 809 SUPERFAMILY Phospholipase D/nuclease 455 739 - -
Pumo7g00157 809 Gene3D Endonuclease Chain A 200 441 - -
Pumo7g00157 809 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 327 365 IPR001736 GO:0003824
Pumo7g00157 809 Pfam Phospholipase D C terminal 727 798 IPR024632 -
Pumo7g00157 809 SUPERFAMILY Phospholipase D/nuclease 152 445 - -
Pumo7g00157 809 Gene3D Endonuclease Chain A 486 702 - -
Pumo7g00157 809 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 151 IPR035892 -
Pumo7g00157 809 CDD C2_plant_PLD 2 149 - -
Pumo7g00157 809 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 655 682 IPR001736 GO:0003824
Pumo7g00157 809 FunFam Phospholipase D 468 701 - -
Pumo7g00157 809 Pfam Phospholipase D Active site motif 656 682 IPR001736 GO:0003824
Pumo7g00157 809 Pfam Phospholipase D Active site motif 327 365 IPR001736 GO:0003824
Pumo7g00157 809 Pfam C2 domain 10 128 IPR000008 -
Pumo7g00157 809 ProSiteProfiles C2 domain profile. 1 126 IPR000008 -
Pumo7g00157 809 FunFam Phospholipase D delta 202 445 - -
Pumo7g00157 809 PIRSF PLD_plant 1 809 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pumo7g00157 809 SMART C2_3c 9 125 IPR000008 -
Pumo7g00157 809 PANTHER PHOSPHOLIPASE D 4 797 IPR015679 -
Pumo7g00157 809 SMART pld_4 327 365 IPR001736 GO:0003824
Pumo7g00157 809 SMART pld_4 655 682 IPR001736 GO:0003824
Pumo7g00157 809 CDD PLDc_pPLDalpha_2 493 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00157 Pumo-Chr7 1817261 1821748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00157 1 809 Phospholipase D Gene Family (Wang group) AT3G15730 83.580 0.0 1436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00157 K01115 - gmx:100786410 1630.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00157 7 1817261 1821748 Pumo4g04324 4 84258509 84264006 ECH
Pumo10g00076 10 1428330 1432683 Pumo7g00157 7 1817261 1821748 ECH
Pumo7g00157 7 1817261 1821748 Pumo7g00157 7 1817261 1821748 ECH
Pumo4g04324 4 84258509 84264006 Pumo7g00157 7 1817261 1821748 PCT