Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00141 ATGGCTTTTTGGTTTTGTTGCGGAAAAGTTTCCACTCGAAGGCGAGGGAAAGAACAACCTACATGGCGGGTGTTTTCTTTGAAGGAATTACACTCTGCTACAAATAATTTCAACTATGATAACAAGCTTGGAGAAGGGGGATTCGGCAGTGTGTACTGGGGTCAACTTTGGGATGGATCGCAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAGAGCAGAGACGGAGTTTACTGTTGAACTTGAAATATTGGCAAGAATACGACACAAGAATCTTCTCAGTCTTCGTGGCTACTGTGCTGAAGGACAGGAACGGTTAATTGTATATGAATATATGCAAAATTTGAGCCGTCCACTCTCATCTTCATGGACATCACTCATTCGAATGCCTTCTTGA 399 0.4211 MAFWFCCGKVSTRRRGKEQPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNRAETEFTVELEILARIRHKNLLSLRGYCAEGQERLIVYEYMQNLSRPLSSSWTSLIRMPS 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00141 132 ProSiteProfiles Protein kinase domain profile. 37 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00141 132 Pfam Protein tyrosine and serine/threonine kinase 39 115 IPR001245 GO:0004672|GO:0006468
Pumo7g00141 132 ProSitePatterns Protein kinases ATP-binding region signature. 43 65 IPR017441 GO:0005524
Pumo7g00141 132 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 117 - -
Pumo7g00141 132 FunFam PTI1-like tyrosine-protein kinase At3g15890 9 112 - -
Pumo7g00141 132 Gene3D Phosphorylase Kinase; domain 1 8 112 - -
Pumo7g00141 132 SUPERFAMILY Protein kinase-like (PK-like) 17 115 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00141 Pumo-Chr7 1683041 1685542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00141 8 117 Receptor kinase-like Gene Family AT4G21400 44.545 6.29e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Pumo7g00141 PK_Tyr_Ser-Thr 3.7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00141 - - gmx:100814204 239.195