Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00140 ATGAAAATCGCAATTGGTTCTGCTGAAGGAATTGTGTATCTTCACCACCAAGCAACACCGCATATCATCCACCGTGATATTAAAGCAAGCAACGTGTTGCTGGATTCTGATTTCCGTGCCCGGGTTGCTGATTTCGGGTTTGCTAAGTTGATCCCTGACGGGGCAACGCATGTGACTACAAAAGTTAAGGGTACCCTGGGCTACCTTGCACCAGAATATGCTATGTTAGGCAAAGCAAATGAGAGTTGTGATGTCTACAGTTTTGGCATTCTCCTTCTAGAACTTGCCAGTGGCAAAAGACCAATTGAAAAGCTTAATTCCACGGTGAGGCGATCGATAGTTGATTGGGCATTGCCTTTGGTTTGTGAGAAGAAATTTAGTGAAATTGCTGATCCAAGACTAAATGGGAACTATGTGGAGGGAGAGCTTAAAAGAGTTGTCTTAGTTGCACTTATGTGTGCTCAGGATCTACCTGAGAAGAGACCCACCATGCTTGATGTGGTAGAGCTACTGAAGGGAGAATCTAAAGATAAATTTTCTCATATAGAGAACAGTGAAATGTTCAGAAGCCTTCTAGCTGTAGAAAGCAATGATGGGACATCAGTGGCTGAAGACAGTTTAGACTATATATCAGAAGAAAAAGAATTAGAACGTCCCTTGAAAGAGAATACTTAA 675 0.4222 MKIAIGSAEGIVYLHHQATPHIIHRDIKASNVLLDSDFRARVADFGFAKLIPDGATHVTTKVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKRPIEKLNSTVRRSIVDWALPLVCEKKFSEIADPRLNGNYVEGELKRVVLVALMCAQDLPEKRPTMLDVVELLKGESKDKFSHIENSEMFRSLLAVESNDGTSVAEDSLDYISEEKELERPLKENT 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00140 224 Gene3D Transferase(Phosphotransferase) domain 1 1 189 - -
Pumo7g00140 224 SMART serkin_6 2 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00140 224 Pfam Protein kinase domain 7 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00140 224 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 184 - -
Pumo7g00140 224 FunFam PTI1-like tyrosine-protein kinase At3g15890 1 187 - -
Pumo7g00140 224 MobiDBLite consensus disorder prediction 198 224 - -
Pumo7g00140 224 SUPERFAMILY Protein kinase-like (PK-like) 2 171 IPR011009 -
Pumo7g00140 224 MobiDBLite consensus disorder prediction 207 224 - -
Pumo7g00140 224 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00140 224 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00140 Pumo-Chr7 1682269 1683027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00140 1 167 Trihelix Transcription Factor Family AT1G68690 49.708 6.02e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Pumo7g00140 Pkinase 1.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00140 - - gmx:100791193 424.861