Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00138 ATGGCGATCCTTTCCCTCCCTCCTCTTCCTTCTTCCTTCTGTGGCGCGATCCACCTTCGCTCTCACAACAACCTCGTTTTCATCGCTTCTCCTCTGCCTCTCTCTTCCAACTCCAACTCCAATTTCATCAACTGCAGCCGCCGGCGCTTTGCGACCGTGGTTGCTGCAGCTTCCGGCGATTACTACGCTACTCTCGGACTCTCCAAATCTGCCTCCGCCAAGGAAATCAAAGCTGCTTATCGAAGACTAGCTCGCCAGTATCATCCTGATGTGAACAAGGAACCTGGAGCCACTGAAAAGTTCAAACAGATTAGCACTGCTTATGAGGTGCTATCAGATGATAAAAAGAGGTCTCTCTATGATCAATATGGCGAGGCTGGAGTTAAGAGTACTGTAGGGGGAGCATCAGCTGCCTATACGACTAATCCATTTGACTTATTTGAGACATTTTTTGGGTCAAGTATGGGTGGTTTCTCTGGCATGGATCCAACTGAATTTGGAACACGGGAACGGCGTACTACTGTTAGTAAGGGTCAAGACATACGTTATGATATTTCCTTGGAATTTTCTGAGGCAATTTTCGGAGCAGAGAGAGAATTTGAGCTTTTTCATATGGAAACCTGCAAAGTTTGTAGTGGTACTGGAGCAAAGATAGGCTCCAAGATGAGAATATGTTCAACATGTGGTGGGAGGGGTCAGGTGATGAGAACTGAACAAACACCTTTTGGGTTGTTCTCACAGGTTTCAGTGTGTCCAAACTGTGGAGGGGATGGTGAAGTCATATCTGAATATTGCACTAATTGCAGAGGTGAAGAACGAATACGGGTTAAGAAAAACATTAAAGTTAAAGTTCCACCCGGGGTTAGCTCAGGCAGTATACTGCGAGTTGCTGGAGAGGGTGATGCTGGACCAAGAGGGGGTCCTTCTGGAGATCTTTATGTTTATCTTGATGTGGAGGAGATATCAGGAATCCAAAGAGATGGCATTAATCTCCGCTCTACAATATCAATAAGTTATCTAGATGCCATACTAGGGGCAGTTGTCAAGGTGAAGACAGTTGAAGGCATTTCTGAACTTCAAATACCTCCTGGTACCCAACCTGGAGATGTCCCAATCCTAGCAAGGAAAGGTGCACCAAAATTAAACAAACCATCAATACGTGGTGACCACTTGTTTACTGTTAAAGTTACAATACCAAAACGTATCAGTACAATGGAACGTGAGTTGCTTGAAGAAGTTTCTTTGCTACGTGACACAACAAGCAGCCATTCAAAATCTTATCTTAAAACCCGCTCTTCTAAAAGAAGTACCGAAGGTCCTGCAGCTCAAAATGTTGAAAGTACAGTAGCAACAGTGGCGGAACAAACTGCACAACCAGATGATCAAAATGACGTGTGGAAGAAATTGAAGGACATTGCTGGATCTGTTGCAAATGGAGCTTTCAAGTTGCTGAAAGATAATCTTTAG 1467 0.4444 MAILSLPPLPSSFCGAIHLRSHNNLVFIASPLPLSSNSNSNFINCSRRRFATVVAAASGDYYATLGLSKSASAKEIKAAYRRLARQYHPDVNKEPGATEKFKQISTAYEVLSDDKKRSLYDQYGEAGVKSTVGGASAAYTTNPFDLFETFFGSSMGGFSGMDPTEFGTRERRTTVSKGQDIRYDISLEFSEAIFGAEREFELFHMETCKVCSGTGAKIGSKMRICSTCGGRGQVMRTEQTPFGLFSQVSVCPNCGGDGEVISEYCTNCRGEERIRVKKNIKVKVPPGVSSGSILRVAGEGDAGPRGGPSGDLYVYLDVEEISGIQRDGINLRSTISISYLDAILGAVVKVKTVEGISELQIPPGTQPGDVPILARKGAPKLNKPSIRGDHLFTVKVTIPKRISTMERELLEEVSLLRDTTSSHSKSYLKTRSSKRSTEGPAAQNVESTVATVAEQTAQPDDQNDVWKKLKDIAGSVANGAFKLLKDNL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00138 488 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 38 420 - -
Pumo7g00138 488 Pfam DnaJ domain 60 121 IPR001623 -
Pumo7g00138 488 FunFam Chaperone protein dnaJ A6 chloroplastic 208 272 - -
Pumo7g00138 488 ProSitePatterns Nt-dnaJ domain signature. 101 120 IPR018253 -
Pumo7g00138 488 CDD DnaJ 60 113 IPR001623 -
Pumo7g00138 488 Hamap Chaperone protein DnaJ [dnaJ]. 57 472 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pumo7g00138 488 ProSiteProfiles dnaJ domain profile. 60 124 IPR001623 -
Pumo7g00138 488 SUPERFAMILY Chaperone J-domain 57 161 IPR036869 -
Pumo7g00138 488 Pfam DnaJ C terminal domain 181 399 IPR002939 -
Pumo7g00138 488 SMART dnaj_3 59 116 IPR001623 -
Pumo7g00138 488 Gene3D - 178 314 - -
Pumo7g00138 488 ProSiteProfiles Zinc finger CR-type profile. 195 277 IPR001305 GO:0031072|GO:0051082
Pumo7g00138 488 CDD DnaJ_C 179 402 - -
Pumo7g00138 488 CDD DnaJ_zf 208 271 IPR001305 GO:0031072|GO:0051082
Pumo7g00138 488 Pfam DnaJ central domain 208 271 IPR001305 GO:0031072|GO:0051082
Pumo7g00138 488 FunFam Chaperone protein dnaJ 1, mitochondrial 319 426 - -
Pumo7g00138 488 PRINTS DnaJ domain signature 96 116 IPR001623 -
Pumo7g00138 488 PRINTS DnaJ domain signature 116 135 IPR001623 -
Pumo7g00138 488 PRINTS DnaJ domain signature 80 95 IPR001623 -
Pumo7g00138 488 PRINTS DnaJ domain signature 62 80 IPR001623 -
Pumo7g00138 488 FunFam Chaperone protein dnaJ A6 chloroplastic 57 163 - -
Pumo7g00138 488 MobiDBLite consensus disorder prediction 424 445 - -
Pumo7g00138 488 FunFam Putative Mitochondrial DnaJ chaperone 265 314 - -
Pumo7g00138 488 NCBIfam molecular chaperone DnaJ 60 413 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pumo7g00138 488 SUPERFAMILY HSP40/DnaJ peptide-binding domain 176 319 IPR008971 GO:0006457|GO:0051082
Pumo7g00138 488 Gene3D - 324 415 - -
Pumo7g00138 488 Gene3D - 208 272 - -
Pumo7g00138 488 SUPERFAMILY HSP40/DnaJ peptide-binding domain 325 410 IPR008971 GO:0006457|GO:0051082
Pumo7g00138 488 Gene3D DnaJ domain 57 162 IPR036869 -
Pumo7g00138 488 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 195 274 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00138 Pumo-Chr7 1663660 1670102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00138 61 123 C2H2 Transcription Factor Family AT1G74250 47.826 1.74e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00138 K03686 - gmx:100798567 697.967