Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00111 ATGGCAGATTCTGCAAAGAAGGTGTGCGTAACTGGTGCTGGAGGATTCGTAGCGTCTTGGCTTGTTAAGCTTCTTCTTTCCAAAGGCTACATTGTCCATGGAACTGTCAGAGAACCTGGTGGTCAGAAATATGAACACTTGCTGAAACTCGAGGGAGCTTCTGAAAACCTTACACTCTTCAAGGCAGATCTCTTGAATTATGAATCTCTTAGCTCCGCAATTTCTGGATGCACTGCAGTTTTCCATGTTGCTTGCCCTGTACCCTCAATAATTGTTCCCAACCCTGAGGTAGACATGATTGAACCTGCTGTGAAAGGAACCACTAATGTACTTGAAGCTTCCCTTGAAGCTAAAGTGCAACGAGTTGTCTTTGTATCATCTGTAGCTGCTGTTATCATTAACCCAAATTTGCCTAAAGATAAAGTGATTGATGAGTCCTATTGGTCTGATAAAGATTACTGCAAAAGAACTCAGAACTGGTACTGTTTTTCCAAGACAGAGGCAGAGGAGCAAGCCCTGGACTTTGCCAAAAGAACTGGGCTTGATGTGGTAAGCATTTGTCCTTCCCTTGTGTTCGGGCCAATTTTACAGTCAACCACTGTTAATACAAGTAGCTTGGTTCTCCTCAAATTTTTAAAAGGTTGTGACTCATTGGAGAATAAGATCCGTTGGATGGTTGATGTACGAGATGTAGTTGATGCAATACTTTTGGCTTATGAGAAGCTTGAGGCAGAAGGGAGATACATATGCAATTCACATACCATCAAGACACGGGATTTGCTGGAGAAACTAAAGAGTATATATCCCAGCTACAAGTACCCTACGAACTATACTGAGGTGGACGATTACAAAAGTTTCAGCTCAGAGAAACTGCAGAGGTTGGGTTGGAAATACAGGTCGCTGGAGAAAACACTCGTTGATTCTGTTGAGAGCTATCGAGATGCTGGCCTCCTTCAATCAGAATAA 966 0.4275 MADSAKKVCVTGAGGFVASWLVKLLLSKGYIVHGTVREPGGQKYEHLLKLEGASENLTLFKADLLNYESLSSAISGCTAVFHVACPVPSIIVPNPEVDMIEPAVKGTTNVLEASLEAKVQRVVFVSSVAAVIINPNLPKDKVIDESYWSDKDYCKRTQNWYCFSKTEAEEQALDFAKRTGLDVVSICPSLVFGPILQSTTVNTSSLVLLKFLKGCDSLENKIRWMVDVRDVVDAILLAYEKLEAEGRYICNSHTIKTRDLLEKLKSIYPSYKYPTNYTEVDDYKSFSSEKLQRLGWKYRSLEKTLVDSVESYRDAGLLQSE 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00111 321 Gene3D - 1 321 - -
Pumo7g00111 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 313 IPR036291 -
Pumo7g00111 321 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 309 - -
Pumo7g00111 321 FunFam NAD(P)-binding Rossmann-fold superfamily protein 1 319 - -
Pumo7g00111 321 Pfam NAD dependent epimerase/dehydratase family 8 244 IPR001509 -
Pumo7g00111 321 CDD FR_SDR_e 8 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00111 Pumo-Chr7 1291577 1294360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00111 1 318 Monolignol Biosynthesis Gene Families AT2G33590 62.500 3.14e-144 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00111 - - gmx:100784817 557.755