Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00099 ATGCAGCAAATCGGAAAAACGAAAACAAACACGACATTCGACAAAACACACATAGAAGAACATCATCATTTTGAACGCATAAAAATCTCAACCACGTTATCAGCTCAGAGAAGCACAGTTTCAAGAACAAAATGGGGAGAGAGAGAGAGAGAAGTTGAACTTACAGTGATCGGCGCAGTGAAATTAAAGGTGGAGACGTTGTCGCGGCGGACTTCGAAGACGACGGAGATGCTGTCGCGACGGACTTTGGAGACGACAGAGACACTGTCACGACGGACTTTGGAGACGACGGAGACGCTGTCGCGGTGGACTTCGAAGGAGATTAAGCCTCTTCTCAAACAAACAATGTGTCGCGACGGACTTCGGAGACGCTGCCGCAGTGGACTTCGAAGGAGATGGAGCATCGTCTCAAACAAACAGCATGTCGCGGTGGACTTCAGAGACGATGGAGACGCTGTCGCAACAGACTTCGGAGGAGATGGAGCTTCATCTCAAACAAACGGCGTCCTGAGAGGGATGCTCGAGGGTTTGGGAGAATCTCAACACAGATACGAAAAGAAGAGTGTTGTGCTTTGGGAGGAAAATGAAATTGGATGTGGAGAGGAAGTGGTGCATGGTACTTACTACTTAGAAAGAGGAATGGATCACGAGGAAGTCCCATCAGTACCTTCCACACCTGCAACACCAGGGACTCCTGGTGCTCCTCTTTTTGGTGGGCTCAGGTTTGAGAAACCTAATGGTGTTGTTAGGAAATCGTCCTTCCTCAAAAGTTGCAAATGTTTCAGTGTTGATGAATGGACTCTAGAAGATGGAGCCATGCCTAGAGTCTCTTGCTCTTTACCAGCCCCTCATATCCCTCTCGCAAAAAAGGTTGGAGCTGAGTTTATTGGCACGTTCATTCTCATGTTTGCCGCAATAGGCACTGCTATTGTGAACCAAAAGACACATGGCTCAGAGACTCTAGTTGGATGTGCTGCAGCTAATGGACTTGCTGTCATGATCATCATTTTCTCCACTGGCCACATCTCCGGGGCTCATCTTAACCCCGCTGTCACTATTTCCTTCGCTGCATTAAAGCACTTCCCATGGAAAAATGTGCCTGTGTATATTGGTACACAAATTTTGGCATCAGTAAGTGCTGCATTTGCTCTGAAGGCGGTTTTTCATCCCTTCATGAGCGGTGGAGTGACGGTCCCTTCAGTGGGATATGGCCAAGCTTTCGCCACAGAGTTCATTGTCAGCTTTATTCTTATGTTCGTTGTCACTGCGGTCGCCACCGACACAAGAGCTGTGGGAGAACTTGCGGGAATCGCGGTGGGAGCCACTGTCATGCTCAACATACTCATAGCCGGGCCAGCAACTGGAAGTTCAATGAACCCGGTTAGAACACTGGGTCCAGCAATTGCTGCAAACAACTACAAGGGCATATGGGTCTATCTCATAGCTCCCATACTTGGAACTCTGTGTGGGGCAGGTGCCTACACTGTGGTCAAGCTGCCTGAGGAAGAGGCAACAAAGGCACCTTCTGCTACTAATGGCAGCTTCAGAAGGTGA 1554 0.4891 MQQIGKTKTNTTFDKTHIEEHHHFERIKISTTLSAQRSTVSRTKWGEREREVELTVIGAVKLKVETLSRRTSKTTEMLSRRTLETTETLSRRTLETTETLSRWTSKEIKPLLKQTMCRDGLRRRCRSGLRRRWSIVSNKQHVAVDFRDDGDAVATDFGGDGASSQTNGVLRGMLEGLGESQHRYEKKSVVLWEENEIGCGEEVVHGTYYLERGMDHEEVPSVPSTPATPGTPGAPLFGGLRFEKPNGVVRKSSFLKSCKCFSVDEWTLEDGAMPRVSCSLPAPHIPLAKKVGAEFIGTFILMFAAIGTAIVNQKTHGSETLVGCAAANGLAVMIIIFSTGHISGAHLNPAVTISFAALKHFPWKNVPVYIGTQILASVSAAFALKAVFHPFMSGGVTVPSVGYGQAFATEFIVSFILMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGSSMNPVRTLGPAIAANNYKGIWVYLIAPILGTLCGAGAYTVVKLPEEEATKAPSATNGSFRR 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00099 517 ProSitePatterns MIP family signature. 346 354 IPR022357 -
Pumo7g00099 517 Gene3D Glycerol uptake facilitator protein. 283 511 IPR023271 -
Pumo7g00099 517 MobiDBLite consensus disorder prediction 78 95 - -
Pumo7g00099 517 FunFam Aquaporin NIP2-1 277 509 - -
Pumo7g00099 517 SUPERFAMILY Aquaporin-like 284 504 IPR023271 -
Pumo7g00099 517 PRINTS Major intrinsic protein family signature 328 352 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo7g00099 517 PRINTS Major intrinsic protein family signature 365 384 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo7g00099 517 PRINTS Major intrinsic protein family signature 440 462 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo7g00099 517 PRINTS Major intrinsic protein family signature 477 497 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo7g00099 517 PRINTS Major intrinsic protein family signature 289 308 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo7g00099 517 PRINTS Major intrinsic protein family signature 409 427 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo7g00099 517 Pfam Major intrinsic protein 286 494 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo7g00099 517 CDD MIP 289 497 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo7g00099 517 PANTHER AQUAPORIN NIP2-1 257 507 IPR034294 -
Pumo7g00099 517 MobiDBLite consensus disorder prediction 73 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00099 Pumo-Chr7 1167113 1185272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00099 214 517 Major Intrinsic Protein MIP AT1G80760 75.974 9.48e-162 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00099 K09874 - gmx:100798410 544.273