Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00094 ATGCCAACTGACACGTCATCAGTTTCCTGCGGCGAAATCGTGTGTGTGACCGGTGCCGGCGGGTTCATAGCCTCTTGGCTTGTCAAACTTCTCTTAGAGAAAGGCTACACTGTGAGAGGAACCGTGAGAAACCCAGATGATCCGAAGAATGGTCATTTGAAAGAGTTGGAAGGGGCGAAGGAGAGGCTAACTCTGCATAAAGTTGATCTCTTTGATATTGACTCCATTAAAGCTGCTCTTCACGGTTGCCACGGTATCTTCCACACCGCTTCTCCGGTCACCGACAACCCTGAAGAGATGGTGGAGCCAGCAGTAAATGGAACGAAGAATGTGATCACAGCAGCTGCAGAAGCAAAAGTGCGACGCGTGGTGTTCACTTCGTCAATTGGCACCGTCTATATGGACCCCAATACCAGTAGGGATGTGTTGGTTGATGAATCATTCTGGAGTGATTTGGAGTACTGCAAGAACACCAAGAATTGGTATTGCTATGGGAAGACGGTGGCTGAACAAACAGCATGGGATGTTGCAAAAGAGAGAGGGGTGGACTTGGTTGTGGTGAACCCGGTTTTGGTTATTGGACCATTGTTGCAACCCACGATTAATGCTAGTACAATTCACATCCTAAAGTACCTTACTGGCTCTGCCAAGACTTATGTTAATGCCACTCAAGCTTACGTACATGTCAAGGATGTGGCATTAGCTCACATGCTTGTTTATGAGACAGCTTCAGCTTCTGGTCGATACATATGTGCCGAAAGTTCGCTGCATCGTGGTGAGCTAGTTGAAATTTTGGCCAAGTTTTTCCCCGAGTACCCAATTCCAACCAAATGTTCAGATGAAAGGAACCCGAGAGTAAAACCCTACATATTTTCAAATCAAAAGCTGAAAGAGTTGGGATTGGAATTCACCCCAGTGAAGCAGTGTCTATATGACACCGTTAAAAATCTGCAAGAGAACGGCCACCTTCCTGTCCCACCAAAGCAAGAAGACTCCTATTGA 1002 0.4661 MPTDTSSVSCGEIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDPKNGHLKELEGAKERLTLHKVDLFDIDSIKAALHGCHGIFHTASPVTDNPEEMVEPAVNGTKNVITAAAEAKVRRVVFTSSIGTVYMDPNTSRDVLVDESFWSDLEYCKNTKNWYCYGKTVAEQTAWDVAKERGVDLVVVNPVLVIGPLLQPTINASTIHILKYLTGSAKTYVNATQAYVHVKDVALAHMLVYETASASGRYICAESSLHRGELVEILAKFFPEYPIPTKCSDERNPRVKPYIFSNQKLKELGLEFTPVKQCLYDTVKNLQENGHLPVPPKQEDSY 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00094 333 CDD FR_SDR_e 14 301 - -
Pumo7g00094 333 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 13 314 - -
Pumo7g00094 333 Gene3D - 12 333 - -
Pumo7g00094 333 Pfam NAD dependent epimerase/dehydratase family 14 244 IPR001509 -
Pumo7g00094 333 FunFam Cinnamoyl-CoA reductase 1 5 333 - -
Pumo7g00094 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 317 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00094 Pumo-Chr7 1106726 1110413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00094 11 277 Monolignol Biosynthesis Gene Families AT1G80820 73.408 1.15e-141 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00094 K09753 - gmx:100799994 647.506