Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00093 ATGACTGTCACAGGTTCATCTTCTGGGCAGCCTCAATTCATTGCCGGCACCGGTGGTAACCGGAGCTTGTCGAATGCGCCGCTGATTGAAAACTCAGATACTGATCAAATTGTTGTACCTGATAGAAAAAGCTGGAAAAACTTATTAGCTTACGTGGGACCTGGATTTCTTGTTTCCATTGCATATATCGACCCAGGAAACTTTGAGACGGATCTTCAATCAGGGGCACAATATAAATATGAGTTACTTTGGATCATATTGGTGGCGTCATGTGCTGCTCTTCTCATTCAAACGATGGCAGCTAATCTTGGGGTTGTAACTGGAATGCACCTAGCAGAGCATTGTAGAGCTGAATATTCTCGGGTGCCCAACTTTGTCCTTTGGGTGATTGCTGAAATTGCCATAGTAGCCTGTGACATTCCTGAAGTAATTGGGACAGCCTTTGCATTGAACATGCTCTTCAACATACCTGTTTGGGTCGGTGTTCTTCTGACAGGACTCAGTACATTGATCCTCTTAGCATTACAGCAATATGGGGTAGTTAGGAAACTTGAATTCTTCATTGCATTTCTAGTATTTACAATTGCTGGTTGCTTTCTGGCTGAGCTTGGATATGCAAAGCCGGTGGCGAAAGAAGTTGTGACTGGTCTTTTTGTTCCAAAACTTGGGGGGCATGGTGCCACTGGTCTAGCAATTTCACTCCTTGGGGCAATGGTTATGCCGCACAACCTCTTCCTCCACTCAGCGCTGGTGCTTTCCAGGAAAATACCGCGATCAGTTCGTGGAATCAAAGAGGCTTGCAGATTTTACATGATAGAAAGTGCCTTTGCTCTTACGGTGGCCTTCCTCATAAATATTTCCGTTATTTCTGTAAGTGGTGCTGTGTGCAATTCTACAAACTTAAGTGCTGAAGATCAGAATAGCTGTCAGGATTTGGATTTGAACAAGGCCTCCTTTTTATTAAGAAACGTCTTGGGCAAATGGAGTTCAAAACTATTTGCAGTTGCTTTACTTGCCTCAGGCCAAAGTTCTACTATAACAGGAACATATGCAGGGCAATACGTCATGCAGGGATTTCTTGATTTGAGACTGAAGTCATGGATTCGGAATCTGCTAACTCGTTGCATAGCCATTGTTCCTAGTTTGATTGTTGCACTCATTGGTGGCTCTGCTGGAGCTGGGGAGCTCATCATAATTGCATCGATGATCTTATCATTTGAGCTTCCTTTTGCCTTGATTCCACTCCTCAAGTTCACTAGCAGCAAAATCAAGATGGGAGAACATGTCAACTCAATCACGATTTCGGCTGTTACTTGGATCATTGGTTCCCTCCTCATGGGCATAAATATATACTATTTATTGACTAGCTTTGTCAAGTTGCTTCTTCATGCCCACTTAAAAATTGTGGCTAAGGTGTTTCTCGGGATATTGGGATTTTCGGGCGTGGCATTATATATTGGAGGCATTGCGTATCTAGTGTTTCGCAAAAATAAAATGACTACACACATTTTGGCATTTAGAACACCGGAAGATCAGCAAATGGCAAATGAACAAGGTGATATATCAATGTATAGTCTCCCAAGAGAAGACATAGTAAGCATGCAATTGCCTCAAAAAAGGAGCCCGGCAGAAATTGATTGA 1641 0.429 MTVTGSSSGQPQFIAGTGGNRSLSNAPLIENSDTDQIVVPDRKSWKNLLAYVGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALLIQTMAANLGVVTGMHLAEHCRAEYSRVPNFVLWVIAEIAIVACDIPEVIGTAFALNMLFNIPVWVGVLLTGLSTLILLALQQYGVVRKLEFFIAFLVFTIAGCFLAELGYAKPVAKEVVTGLFVPKLGGHGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYMIESAFALTVAFLINISVISVSGAVCNSTNLSAEDQNSCQDLDLNKASFLLRNVLGKWSSKLFAVALLASGQSSTITGTYAGQYVMQGFLDLRLKSWIRNLLTRCIAIVPSLIVALIGGSAGAGELIIIASMILSFELPFALIPLLKFTSSKIKMGEHVNSITISAVTWIIGSLLMGINIYYLLTSFVKLLLHAHLKIVAKVFLGILGFSGVALYIGGIAYLVFRKNKMTTHILAFRTPEDQQMANEQGDISMYSLPREDIVSMQLPQKRSPAEID 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00093 546 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 47 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00093 546 Pfam Natural resistance-associated macrophage protein 68 431 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00093 546 Hamap Divalent metal cation transporter MntH [mntH]. 32 457 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00093 546 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 40 500 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00093 546 PRINTS Natural resistance-associated macrophage protein signature 127 153 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00093 546 PRINTS Natural resistance-associated macrophage protein signature 369 386 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00093 546 PRINTS Natural resistance-associated macrophage protein signature 231 254 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00093 546 PRINTS Natural resistance-associated macrophage protein signature 341 360 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00093 546 PRINTS Natural resistance-associated macrophage protein signature 155 174 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00093 546 PRINTS Natural resistance-associated macrophage protein signature 181 202 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00093 546 PRINTS Natural resistance-associated macrophage protein signature 401 420 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pumo7g00093 546 NCBIfam Nramp family divalent metal transporter 53 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00093 Pumo-Chr7 1097974 1105302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00093 16 539 Inorganic Solute Cotransporters AT1G15960 78.137 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00093 K21398 - gmx:100815628 989.178