Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00092 ATGGATCCACAAAACCCGAGAAGCATAATCTTCAACAAGTACGAGATGGGCCGGGTCCTGGGGCAGGGAAACTTCGCCAAAGTCTACCACGGGCGAAACCTCAACACCAACGAGAGCGTCGCCATAAAGGTCATCAAGAAAGACAAGCTCAAAAAGGAGCGACTCGTGAAGCAGATCAAGCGCGAGGTGTCGGTCATGAGGCTCGTGCGCCATCCCAACATCGTTGAACTCAAGGAAGTCATGGCCACAAAAGGGAAAATCTTCCTCGTTATGGAATACGTCAAGGGCGGTGAACTCTTCTCCAAAGTCAACAAAGGAAAACTCACCGAAGATCTCGCCAGAAAGTACTTCCAACAACTCATCAGCGCCGTCGATTTTTGCCACAGCCGCGGCGTCACCCACCGCGACCTCAAGCCCGAGAATCTCCTCCTCGACCAAAACGAAGACCTTAAAGTCTCCGACTTCGGACTCTCAGCGCTGCCGGAGCAGCGCCGCGCCGACGGCATGCTCGTTACCCCGTGTGGGACCCCTGCTTACGTGGCACCCGAGGTCTTAAAGAAAAAAGGTTACGACGGTTCAAAGGCTGATATTTGGTCCTGTGGGGTAATCCTCTTCGCTTTGCTTTGTGGCTATTTACCCTTCCAAGGTGAGAATGTTATGAGAATTTATCGAAAAGCGTTTAGGGCTGAATATGAATTCCCAGAATGGATTTCGCCGCAGGCGAAATCCCTCATTTCGAATCTCCTTGTTGCTGATCCTGGGAAGAGGTATTCTATTCCTGATATTATGAAGGATCCTTGGTTTCAAATTGGGTTCACGAGGCCAATTGCGTTTTCTATAAAGGAGTCTAATGTTGAAGACAACATTGATTTCGACGATGTGGGGAACAACGAGAACGAGGATCAGGAGGTTACAATGGGGAAACCCGCGAGGCCGTTTTACAACGCGTTTGAGATAATCTCGTCCTTGTCGCACGGGTTTGATCTCAGGAGTTTGTTTGAGACGAGGAAGCGGTCGCCGTCGATGTTTATATGCAAGTTTTCGGCTTCGGCGGTGTTGGCGAAGGTGGAGGCGGTGGCGAAGAAGCTGAACTTTAGGGTGACGGGGAAGAAGGAGTTTGTGGTGAGGATGCAGGGGGCGGAGGAGGGGAGGAAGGGGAAGCTGGCCATGACGGTCGAGGTTTTCGAGGTGGCGCCGGAGGTCGCGGTGGTGGAGTTTTCTAAGTCTGCCGGAGATACGTTGGAGTATGTTAAGTTCTGTGAGGAACAAGTGAGACCCTCTCTCAAAGACATTGTTTGGAGCTGGCAGGGTGATAGTAATCACTGCAACACTTAG 1335 0.5131 MDPQNPRSIIFNKYEMGRVLGQGNFAKVYHGRNLNTNESVAIKVIKKDKLKKERLVKQIKREVSVMRLVRHPNIVELKEVMATKGKIFLVMEYVKGGELFSKVNKGKLTEDLARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDQNEDLKVSDFGLSALPEQRRADGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILFALLCGYLPFQGENVMRIYRKAFRAEYEFPEWISPQAKSLISNLLVADPGKRYSIPDIMKDPWFQIGFTRPIAFSIKESNVEDNIDFDDVGNNENEDQEVTMGKPARPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFICKFSASAVLAKVEAVAKKLNFRVTGKKEFVVRMQGAEEGRKGKLAMTVEVFEVAPEVAVVEFSKSAGDTLEYVKFCEEQVRPSLKDIVWSWQGDSNHCNT 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00092 444 ProSiteProfiles NAF domain profile. 309 334 IPR018451 GO:0007165
Pumo7g00092 444 SMART serkin_6 14 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00092 444 SUPERFAMILY Protein kinase-like (PK-like) 10 269 IPR011009 -
Pumo7g00092 444 Pfam NAF domain 313 368 IPR004041 GO:0007165
Pumo7g00092 444 ProSitePatterns Protein kinases ATP-binding region signature. 20 47 IPR017441 GO:0005524
Pumo7g00092 444 FunFam Non-specific serine/threonine protein kinase 7 307 - -
Pumo7g00092 444 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 429 - -
Pumo7g00092 444 CDD CIPK_C 315 429 - -
Pumo7g00092 444 Gene3D Transferase(Phosphotransferase) domain 1 7 316 - -
Pumo7g00092 444 ProSiteProfiles Protein kinase domain profile. 14 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00092 444 FunFam Non-specific serine/threonine protein kinase 6 93 - -
Pumo7g00092 444 FunFam Non-specific serine/threonine protein kinase 310 433 - -
Pumo7g00092 444 Gene3D Kinase associated domain 1, KA1 317 434 - -
Pumo7g00092 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Pumo7g00092 444 Pfam Protein kinase domain 14 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00092 Pumo-Chr7 1081231 1087572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00092 2 444 CBL-interacting serine-threonine protein kinases AT5G25110 62.302 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pumo7g00092 Pkinase 1.6e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00092 - - gmx:100812424 796.964