Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00090 ATGGATTGTTCATCATGGATTAACACTTCCTTGGATCTCAACATTAATCCTCGCAGAGTTCATGAAGAAGTTCCCGCCGTAAGTATAAAAAAGGAGGTAGAAAGCAAGCTTTTCTCTTTGGGAATGCCCAAGTTTAACGTGGAAGAAGAGTCTACTAGTGACTTGGAGGAGGAACTGAAGCGGGTGACTGCAGAAAACAAGAAGTTGGCCGAAATGCTCTCAGTGGTGTGTGAGAACTACAACACTTTGAGAAGCCATTTGATGGAATATATGAGGAAAAATGGTGAAAAGGAGGTCAGCCCAACATCAAAGAAAAGGAAGTCTGAAAGCAGCAACAACAATAGTAATTTGATGGGAACTAACAATGGAAACTCAGAGAGCAGTTCTACTGATGAAGAATCTTGCAAGAAACCAAGGGAAGAAACCATCAAAGCAAAAATTTCAAGAGTTTATTTCAGGACCGAAGCATCTGATACTACTAGCCTTATTGTGAAAGATGGATACCAATGGAGGAAATATGGGCAAAAAGTGACCAGAGATAACCCTTGTCCAAGAGCATATTTCAAGTGCTCTTTTGCTCCAAGCTGCCCTGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTTCTGGTTGCTACTTATGAAGGGGAACATAATCACCCTCAGGCTTCCCAAATGGAAGCAACATCAGGTTCTGGCCGTAGTGTGACCCTTGGTTCAGTGCCTTGTTCCGCATCTCTCAGTACTTCCACTCCAACACTTGTTACCCTTGACTTGACAAAATCTAAGGGAAGCAACGATTCCAAGAGCACAAAACCTAAAGTAGATTCACCTAAAGTACCTCAGGTTTTGGTGGAACAGATGGCTACTTCTTTGACCACGGATCCTAATTTTAGAGCAGCACTTGTTGCTGCCATCTCCGGAAGATTGATGCACAATAATTGA 951 0.4238 MDCSSWINTSLDLNINPRRVHEEVPAVSIKKEVESKLFSLGMPKFNVEEESTSDLEEELKRVTAENKKLAEMLSVVCENYNTLRSHLMEYMRKNGEKEVSPTSKKRKSESSNNNSNLMGTNNGNSESSSTDEESCKKPREETIKAKISRVYFRTEASDTTSLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPQASQMEATSGSGRSVTLGSVPCSASLSTSTPTLVTLDLTKSKGSNDSKSTKPKVDSPKVPQVLVEQMATSLTTDPNFRAALVAAISGRLMHNN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00090 316 SUPERFAMILY WRKY DNA-binding domain 160 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo7g00090 316 MobiDBLite consensus disorder prediction 218 239 - -
Pumo7g00090 316 FunFam WRKY transcription factor 40 148 226 - -
Pumo7g00090 316 Pfam WRKY DNA -binding domain 165 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g00090 316 MobiDBLite consensus disorder prediction 93 140 - -
Pumo7g00090 316 MobiDBLite consensus disorder prediction 106 129 - -
Pumo7g00090 316 MobiDBLite consensus disorder prediction 220 239 - -
Pumo7g00090 316 Gene3D WRKY domain 143 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo7g00090 316 MobiDBLite consensus disorder prediction 261 283 - -
Pumo7g00090 316 Coils Coil 45 72 - -
Pumo7g00090 316 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 44 312 IPR044810 GO:0003700
Pumo7g00090 316 SMART WRKY_cls 164 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo7g00090 316 ProSiteProfiles WRKY domain profile. 159 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00090 Pumo-Chr7 1029747 1032069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00090 38 316 WRKY Transcription Factor Family AT1G80840 56.122 3.27e-100 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo7g00090 WRKY 3.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00090 - - gmx:100807966 530.406