Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00078 ATGGGAGCCTCATGGCAGCTTACATGTGCCCTCTTGCTACTCATCTCCGCCGTTGCCACCGCCACTGACCACATTGTGGGTGCCAACCGCGGCTGGAACCCTGGCATTAACTACACTCTTTGGGCCAACAACCACACTTTCTATGTGGGCGACCTTATCTCATTCAGGTACCAAAAAAACCAATACAATGTGTTTGAGGTGAACCAAACTGGGTATGACAACTGCACTACAGAAGGGGCAGTGGGGAATTGGAGTAGTGGGAAGGATTTCATACCCCTCAACAAGGCCAAGAGATATTACTTCATTTGTGGCAATGGCCAATGCTTCAGTGGAATGAAAGTCTCCGTTATTGTCCATCCTCTTCCTCCTCCTCCCACCTCTGCAATTGCTGCTGAACATTCAACGCCAAAGTCTCATTCTCCTGTGTTCTTCAAACGGGGATTGCGCTCTCTAGTGGTGTCTTCTGTTTTAGCTTGCTTTGGATTTGTTTGGATTTAG 498 0.4839 MGASWQLTCALLLLISAVATATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMKVSVIVHPLPPPPTSAIAAEHSTPKSHSPVFFKRGLRSLVVSSVLACFGFVWI 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00078 165 ProSiteProfiles Phytocyanin domain profile. 22 120 IPR003245 GO:0009055
Pumo7g00078 165 SUPERFAMILY Cupredoxins 21 119 IPR008972 -
Pumo7g00078 165 Gene3D - 20 121 IPR008972 -
Pumo7g00078 165 Pfam Plastocyanin-like domain 32 112 IPR003245 GO:0009055
Pumo7g00078 165 CDD Phytocyanin_like_1 22 118 - -
Pumo7g00078 165 PANTHER BLUE COPPER PROTEIN 20 130 IPR039391 GO:0009055
Pumo7g00078 165 FunFam Lamin-like protein 20 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00078 Pumo-Chr7 951895 953038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00078 7 164 Phytocyanin Superfamily AT5G15350 38.415 8.75e-37 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00078 - - gmx:100305555 320.472