Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00073 ATGATTGATAGTGGGAGCGAGCAGTCGAGCAGAGAGATGATCATCAATGTGAAGGAATCGACGATGGTGCGGCCGGCGGAGGAGGTGGCGCGGCGGGTGGTGTGGAACTCCAACGTGGACCTCGTGGTCCCCAATTTCCACACCCCCAGCGTCTACTTCTATAGGTCCAATGGCGCCACCAACTTTTTCGATGGGAAGGTTCTGAAGGAGGCACTGAGCAAGGTCCTGGTGCCGTTCTATCCAATGGCTGGCCGGCTCCGGCGAGACGAAGACGGCCGCGTGGAGATTGACTGCGACGGTCAGGGGGTGCTCTTCGTGGAGGCCGACACAGGCGCCGTCATCGACGATTTCGGCGACTTCGCACCCACCCTTGAGCTCCGCCAGCTCATCCCCACCGTCGATTATTCACAAGGGATCGAAACCTATCCCCTGTTGGTGTTACAGGTAACACATTTTAAATGTGGAGGGGTGTCCCTGGGAGTTGGTATGCAACATCATGTAGCAGATGGAGCCTCTGGTCTGCACTTCATCAATACGTGGTCAGATGTGGCTCGTGGCTTGGATGTTTCCATTCCACCATTCATTGATCGTACAATACTTCGTGCCCGTGATCCACCTCGACCTGTTTTTGATCACATTGAATACAAGCCCCCACCAGCCATGAAGACTCAGCAACCTACTAAACCAGGCTCAGACTCAGATAATGCAGCAGCAGCGGTCTCTATTTTCAAACTGACACGTGACCAGCTCAACACACTGAAAGCCAAGTCCAAAGAAGATGGCAACACAATCAGCTATAGTTCTTATGAGATGTTGGCGGGTCACGTGTGGAGAAGTGTATGCAAAGCAAGAGCACTTCCTGATGATCAAGAAACCAAATTGTACATTGCAACTGATGGAAGGTCAAGGTTGCAACCTCCTTCCCCACCAGGTTACTTTGGCAATGTGATATTCACAACCACGCCTATAGCTGTGGCAGGTGATCTCATGTCAAAACCAACATGGTATGCTGCAAGCAGAATCCACAATGCATTGTTACGAATGGACAACGAATATTTGAGATCAGCTCTTGACTATCTAGAGCTGCAACCTGATCTAAAAGCTCTGGTTCGTGGGGCTCATACTTTCAAGTGTCCAAATCTTGGTATCACTAGCTGGACTAGGCTTCCAATCCATGATGCTGACTTTGGTTGGGGAAGGCCCATATTCATGGGACCTGGTGGAATTGCATACGAGGGGCTATCTTTCTTAATTCCAAGCTCAACCAATGATGGGAGCTTGTCTGTGGCAATAGCTCTTCAGCCCGAGCATATGAAGGTGTTTAAGGATTTCTTGTATGACATTTGA 1347 0.5033 MIDSGSEQSSREMIINVKESTMVRPAEEVARRVVWNSNVDLVVPNFHTPSVYFYRSNGATNFFDGKVLKEALSKVLVPFYPMAGRLRRDEDGRVEIDCDGQGVLFVEADTGAVIDDFGDFAPTLELRQLIPTVDYSQGIETYPLLVLQVTHFKCGGVSLGVGMQHHVADGASGLHFINTWSDVARGLDVSIPPFIDRTILRARDPPRPVFDHIEYKPPPAMKTQQPTKPGSDSDNAAAAVSIFKLTRDQLNTLKAKSKEDGNTISYSSYEMLAGHVWRSVCKARALPDDQETKLYIATDGRSRLQPPSPPGYFGNVIFTTTPIAVAGDLMSKPTWYAASRIHNALLRMDNEYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWTRLPIHDADFGWGRPIFMGPGGIAYEGLSFLIPSSTNDGSLSVAIALQPEHMKVFKDFLYDI 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00073 448 Pfam Transferase family 15 443 - -
Pumo7g00073 448 Gene3D - 9 217 IPR023213 -
Pumo7g00073 448 FunFam Spermidine hydroxycinnamoyl transferase 13 215 - -
Pumo7g00073 448 MobiDBLite consensus disorder prediction 208 233 - -
Pumo7g00073 448 FunFam Tryptamine hydroxycinnamoyl transferase 224 446 - -
Pumo7g00073 448 Gene3D - 230 448 IPR023213 -
Pumo7g00073 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00073 Pumo-Chr7 908820 913257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00073 13 448 Monolignol Biosynthesis Gene Families AT5G48930 77.346 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00073 K13065 - gmx:100820075 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04395 4 85002264 85006593 Pumo7g00073 7 908820 913257 PCT