Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00071 ATGACAGTGTTGATTCCGAGGAACACAACCATTCCCATCAAGAAGGAACAGATTTTCTCTACTTACGCTGATAATCAACCAGGAGTGCTAATTCAAGTCTATGAAGGTGAGAGAGCGAGGACCAAAGACAACAATCTTTTAGGGAAGTTTGAACTCACAGGCATCCCTCCAGCGCCAAGAGGAGTTCCTCAAATCAATGTGTGCTTTGACATTGATGCAAATGGAATTTTGAATGTTTCGGCTGAGGATAAGACTGCAGGGGTGAAGAACAAGATCACAATCACCAATGATAAGGGAAGGCTGAGCAAGGAGGAGATTGAGAGGATGGTGCATGAGGCAGAGGATGAGGAGGTGAAGAAGAAGGTGGACGCGAAGAACTCGTTGGAGAACTACGCTTACAACATGAGGAATACGGTGAAGGATGAAAAGTTTGCAGGGAAATTGAACCCTGCTGATAAGCAGAAGATAGAGAAGGCGGTTGATGAAACAGTTGAGTGGCTTGACAGGAACCAACTAGCAGAGGTGGAGGAATTTGAGGACAAATTGAAGGAGTTGGAGGGACTGTGCAACCCAATTATTGCAAAGATGTATCAAGGTGGTGGTGGGGATGTGCCAATGGGTGGTGCAGATGACATTCCTAGTGGTGGTGGCTATGGAAAATCATCCACCGGTGGTACTGGTGCTGGGCCTAAGATTGAAGAAGTTGACTAA 711 0.4613 MTVLIPRNTTIPIKKEQIFSTYADNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIERMVHEAEDEEVKKKVDAKNSLENYAYNMRNTVKDEKFAGKLNPADKQKIEKAVDETVEWLDRNQLAEVEEFEDKLKELEGLCNPIIAKMYQGGGGDVPMGGADDIPSGGGYGKSSTGGTGAGPKIEEVD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00071 236 Coils Coil 168 188 - -
Pumo7g00071 236 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 123 202 IPR029048 -
Pumo7g00071 236 FunFam Heat shock 70 kDa 1 132 - -
Pumo7g00071 236 Pfam Hsp70 protein 1 198 IPR013126 GO:0005524|GO:0140662
Pumo7g00071 236 Coils Coil 96 116 - -
Pumo7g00071 236 PANTHER HEAT SHOCK PROTEIN 70KDA 1 163 IPR013126 GO:0005524|GO:0140662
Pumo7g00071 236 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 129 IPR029047 -
Pumo7g00071 236 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 124 IPR029047 -
Pumo7g00071 236 MobiDBLite consensus disorder prediction 199 236 - -
Pumo7g00071 236 Gene3D - 125 236 IPR029048 -
Pumo7g00071 236 FunFam heat shock cognate 70 kDa protein-like 125 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00071 Pumo-Chr7 897255 897965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00071 1 236 Calmodulin-binding Proteins AT1G16030 77.178 1.29e-127 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00071 K03283 - egr:104450645 413.69