Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00066 ATGGCGAAGAAATCGCAGAAAAACCTCAAGAACAACACTATTGTCAATACCAACAACAACACCAACACCACTGGGAAGCGCACACGCAAAAGCGTCCCAAGAGACTCACCTCCACAACGAAGCTCAATCTATAGGGGTGTCACGAGGCATCGATGGACTGGTCGATATGAGGCTCATTTGTGGGATAAGAATTGCTGGAATGAATCACAGAGCAAGAAAGGAAGACAAGTATATCTAGGGGCATATGATGATGAAGAAGCCGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGCCAAGATACCATTCTCAATTTTCCATTATCAAATTATGAGGAGAAGCTCAGGGAGATGGAGGGCCAATCAAAAGAAGAATATATTGGATCCTTGAGAAGAAAAAGCAGTGGATTCTCTCGAGGAGTTTCAAAATACAGAGGCGTGGCAAGACACCACCATAACGGAAGATGGGAAGCTCGAATTGGAAGGGTCTTTGGCAACAAATATCTATACCTTGGAACTTACGCTACACAAGAAGAAGCAGCCGCAGCATATGACATGGCAGCTATAGAATACAGAGGACTTAACGCCGTTACAAACTTTGACCTGAGCCGTTATGTGAATTGGCCACGTCCTAAAACCGAAGAAAACAATGAAAATATTCCTAGCAATGAAAATGTTCACTCTAATCCTGAACTTGAGCATGAGCTAGGTTCAGGCAGTGATGAGATCACAGCAGAGGGTGTAGCAACATCTTCAGATCAGTCAAATCCTTCACGTCGCACATTCCCTGAAGACATTCAAACAATTTTTGAAAGTCAAGATTCAGGCATCTACACTGAAAATGATGATATCATTTTTGGTGACTTGGGCTCGTTTGGTGCACCAATTTTTCACTACGAGCTTGATGTTTAG 918 0.4357 MAKKSQKNLKNNTIVNTNNNTNTTGKRTRKSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQVYLGAYDDEEAAARAYDLAALKYWGQDTILNFPLSNYEEKLREMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAAAAYDMAAIEYRGLNAVTNFDLSRYVNWPRPKTEENNENIPSNENVHSNPELEHELGSGSDEITAEGVATSSDQSNPSRRTFPEDIQTIFESQDSGIYTENDDIIFGDLGSFGAPIFHYELDV 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00066 305 FunFam AP2-like ethylene-responsive transcription factor 42 111 - -
Pumo7g00066 305 SUPERFAMILY DNA-binding domain 144 205 IPR016177 GO:0003677
Pumo7g00066 305 ProSiteProfiles AP2/ERF domain profile. 43 109 IPR001471 GO:0003700|GO:0006355
Pumo7g00066 305 MobiDBLite consensus disorder prediction 1 27 - -
Pumo7g00066 305 FunFam AP2-like ethylene-responsive transcription factor 144 205 - -
Pumo7g00066 305 MobiDBLite consensus disorder prediction 1 46 - -
Pumo7g00066 305 MobiDBLite consensus disorder prediction 212 240 - -
Pumo7g00066 305 SMART rav1_2 145 209 IPR001471 GO:0003700|GO:0006355
Pumo7g00066 305 SMART rav1_2 43 115 IPR001471 GO:0003700|GO:0006355
Pumo7g00066 305 PRINTS Ethylene responsive element binding protein signature 44 55 IPR001471 GO:0003700|GO:0006355
Pumo7g00066 305 PRINTS Ethylene responsive element binding protein signature 185 205 IPR001471 GO:0003700|GO:0006355
Pumo7g00066 305 Gene3D AP2/ERF domain 144 205 IPR036955 GO:0003700|GO:0006355
Pumo7g00066 305 Gene3D AP2/ERF domain 43 111 IPR036955 GO:0003700|GO:0006355
Pumo7g00066 305 SUPERFAMILY DNA-binding domain 42 111 IPR016177 GO:0003677
Pumo7g00066 305 ProSiteProfiles AP2/ERF domain profile. 145 203 IPR001471 GO:0003700|GO:0006355
Pumo7g00066 305 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 18 232 - -
Pumo7g00066 305 CDD AP2 144 205 IPR001471 GO:0003700|GO:0006355
Pumo7g00066 305 Pfam AP2 domain 144 195 IPR001471 GO:0003700|GO:0006355
Pumo7g00066 305 Pfam AP2 domain 43 101 IPR001471 GO:0003700|GO:0006355
Pumo7g00066 305 MobiDBLite consensus disorder prediction 212 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00066 Pumo-Chr7 840470 844636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00066 39 207 AP2-EREBP Transcription Factor Family AT5G57390 74.556 6.52e-92 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pumo7g00066 AP2 3.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00066 K09285 - gmx:100807781 525.783