Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00058 ATGAAGGGCAAGGCTTGCGAGCTTTGTGATCAACAAGCTTCTCTCTATTGTCCCTCCGATTCTGCATTTCTCTGCACCGACTGCGACGCCGCCGTACACGGCGCCAACTTCCTCGTAGCTCGCCACCTCCGCCGCCTCGTCTGCTCCAAATGCAACCGTTTCGCCGGAATTCACATATCCGGCGCAATATCCAGCCGCCTCTCATCTACCTGCAGCTCTTGCTCGCCGGAGAATCCTTCCGGTGACTCCGATTCTCTCTCTTCCTCTTCTACCTGCGTCTCCAGTTCCGAGTCTTGCGCTACAAAGAAGGTTGAGGCGAGGCGCACGACGGCGGAGAAGAGGAGGAGGAGGAGGAGTTGCTCGAGTTCCGTGACCGAGGACGCATCTCCGGCGGCGAAGAAGCGACGGAGAAATGTGGGATCGGTGGCGGAGGAGGTGGTGGTGTTTGAGAAATGGAGCAGAGAGATAGGGTTAGGGTTAGGGGAGAACGGTAATCGCGTGGCGTCGAACGCTCTGAGTCTGTGCCTCGGAAAGTGGAGGCTGCTTCCGTTCAGGGTGGCTGCGGCGACGTCGTTTTGGTTGGGCCTGAGATTTTGTGGGGACAGAGGCCTCGCCACGTGTCAGAATCTGGCGAGGTTGGAGGCAATATCCGGAGTGCCAGCAAAGCTGATTCTGGCCGCACATGCCAACCTCGCACGTGTCTTCACGCACCGCCGCGAATTGCAGGAAGGATGGGGCGAGTCATCGTATGTGTAA 756 0.5833 MKGKACELCDQQASLYCPSDSAFLCTDCDAAVHGANFLVARHLRRLVCSKCNRFAGIHISGAISSRLSSTCSSCSPENPSGDSDSLSSSSTCVSSSESCATKKVEARRTTAEKRRRRRSCSSSVTEDASPAAKKRRRNVGSVAEEVVVFEKWSREIGLGLGENGNRVASNALSLCLGKWRLLPFRVAAATSFWLGLRFCGDRGLATCQNLARLEAISGVPAKLILAAHANLARVFTHRRELQEGWGESSYV 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00058 251 ProSiteProfiles Zinc finger B-box type profile. 1 42 IPR000315 GO:0008270
Pumo7g00058 251 CDD Bbox1_BBX-like 5 47 - -
Pumo7g00058 251 SMART bboxneu5 1 47 IPR000315 GO:0008270
Pumo7g00058 251 MobiDBLite consensus disorder prediction 105 136 - -
Pumo7g00058 251 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 98 - -
Pumo7g00058 251 Pfam B-box zinc finger 4 34 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00058 Pumo-Chr7 789998 791349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00058 6 251 C2C2-CO-like Transcription Factor Family AT3G21150 32.283 2.39e-25 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo7g00058 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00058 - - gmx:100781783 374.4