Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00050 ATGACCGTGAACGGCCACCATACCGTAAACATCTCTAACAGTAACAGGCACCCTAACGACGATGACGACAACGTTCTCCCTCCCTCCTCCGACAACAACAACAACCACCACGATGATGACGACGAAGGACTCGTGGATCCCGATGATCCTTTTGACATTACTCAAACGAAGAACGCATCGCACGACACGCTTCGCCGTTGGAGACAAGCAGCACTCGTGCTCAATGCGTCCAGGCGTTTTAGATATACTTTGGACTTGAGAAAAGAAGAAGAGAAAGAGCAAAAGAAACACTTGATTAGAGCCCATGCACAAGTCATAAGAGCAGCATTGCTTTTCAGATTGGCCGGTGAACGTGAACTAGTGATAAGTACAGCAGTGTCACCCCCAACTCCAGTTGGTGACTATGATATTGGGCTCGAACAACTTGTTTCAATGTCTAAGGATCAGAATATTTCTGCTTTACAACAATATGGAGGGATTAGAGGCTTATCAAATTTAATAAAATCTAATCCGGATAAAGGTATTAGTGGAGATGATGCTGATCTGTTAAAACGGAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAAGGAAGAAGTTTCTGGAGGTTTTTATGGGAAGCTTGGCAAGATCTGACTCTCATAATATTGATAATAGCTGCTGCAGTGTCATTGGCACTTGGAATAAAAACAGAGGGTTTGGCAGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCTGTTCTTCTTGTCATTGTAGTTACAGCTGTCAGTGATTATCGGCAATCTCTCCAGTTTCAGAATTTGAATGCAGAAAAACAAAATATACAATTGGAGGTTGTTAGAGGTGGGAGAACAATTAAAATGTCAATATTTGATATTGTTGTTGGTGATGTTATACCCCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTATTAATCACGGGCCATTCACTTGCAATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCATAAGGATCACAAAACACCATTTTTGATGTCTGGTTGCAAAGTAGCAGATGGAGTTGGTGTTATGCTGGTGACTGGTGTTGGTATAAATACCGAATGGGGATTGTTGATGGCAAGTATCTCAGAGGACACTGGAGAAGAGACTCCGTTACAGGTACGTTTGAATGGAGTAGCAACTTTTATTGGTGTAGTTGGGCTTACTGTAGCTGTTTTAGTGCTTGCTGTCCTCTTGGGCAGATACTTTTCCGGCCATACCAAAGATTTAGATGGAAATGTCGAATTTGTTGCCGGAAAGACTAGTGTTAGCAATGTAGTAGATGGGGTTATCAAAATTTTTACCATTGCAGTCACAATTGTGGTCGTTGCAGTGCCTGAAGGTCTACCTTTGGCTGTTACCTTAACCTTGGCATACTCAATGCGGAAAATGATGGCAGACAAGGCCTTGGTACGGCGGCTATCAGCCTGTGAAACTATGGGGTCTGCCACAACAATTTGCAGTGATAAGACAGGAACATTGACCTTAAATCAGATGACTGTAGTTGAGGCATATGTTGGGAGCACGAAAATAAATCCGCCGGATGACTCATCAAAGTTGCATCCAAAAGCATTGTCTCTGATAAATGAGGGCATTGCACAGAATACAACCGGAAATGTTTTTGTACCTAAGGATGGCGGAGAGACAGAGGTGTCTGGATCTCCTACAGAGAAGGCAATTCTTTCATGGGCAGTCAAGTTGGGTATGAATTTTGATGTTATCAGATCAAATTCAACAGTTCTCCATGTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTTGCTTTGAAGCTGGGGGATTCTGGAATACATATACATTGGAAGGGAGCCGCAGAGATAGTTCTAGGAACATGTACTCAATATCTTGATTCAGATGGTCAATTGCAATCCATTGAAGAGGAGAAGTCTTTTTTCAAGGATGCTATTGACGACATGGCTGCTCGCAGCTTGCGTTGTGTAGCCATTGCATACAGATCATATGAATTAGATAAAGTTCCATCTAGTGAACAGGATTTAGACCAATGGTCCTTACCGGAACATGAGCTTGTTTTGCTTGCTATTGTTGGAATAAAGGATCCGTGTCGCCATGGTGTCAAAGATGCTGTAAAAGTATGCACTGGTGCTGGTGTTAAGGTACGCATGGTTACTGGAGACAACCTTCAAACAGCAAAGGCAATAGCTTTGGAGTGTGGCATATTGGCTTCAATTGAAGATGCTGTTGAGCCAAATATAATTGAAGGAAAGAAATTCCGTGAACTATCTGAAAAGGAAAGAGAAGACATTGCCAAGAAAATAACTGTGATGGGGAGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCGCTACGTAAAGGAGGGGAAGTTGTTGCTGTCACAGGAGATGGAACCAATGATGCTCCTGCACTTCATGAGGCAGATATTGGTCTTTCAATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCCTAGATGATGACTTTGCATCAGTAGTAAAGGTTGTCCGCTGGGGCCGCTCTGTATATGCAAATATTCAGAAATTTATCCAGTTCCAGCTTACAGTTAATGTTGCTGCTCTTGTAATAAATGTTGTGGCAGCAATAACTTCTGGTGATGTTCCTCTAAATGCAGTACAGCTTTTGTGGGTCAACCTCATCATGGATACACTTGGGGCGCTTGCACTGGCTACTGAACCGCCAACAGACCGCCTAATGCACAGATCACCAGTTGGCCGAAGAGAACCTCTTATAACAAATATAATGTGGAGAAACTTGGTCGTACAGGCTGTCTATCAAATCGCAGTTCTTCTCGTTCTTAACTTCTGTGGTGAAAGTATTCTACCCAAACAAGATACTAGAGCTGATGACTTTCAAGTGAAGAATACGCTAATATTCAACGCGTTCGTCCTGTGCCAAATATTCAATGAATTCAATGCTCGGAAACCGGATGAAATGAATGTTTTCCGTGGAGTGACGAAGAACAAACTTTTCATGGGAATTGTTGGAGTGACCTTTATACTTCAGATAATCATCATCGAGTTCCTTGGAAAGTTCACCTCAACAGTGAGGCTTGATTGGAAGCTATGGCTTGCTTCTCTTGGTATTGGCTTTTTCAGCTGGCCCCTTGCTATAGTCGGAAAATTCATTCCAGTTCCCAAAACACCATTGGCTCGTTACTTCTTGAAGCCAATCAGGCGATTGAAGAGGTCTAGGTCTCGTGCTACACAATAG 3288 0.4252 MTVNGHHTVNISNSNRHPNDDDDNVLPPSSDNNNNHHDDDDEGLVDPDDPFDITQTKNASHDTLRRWRQAALVLNASRRFRYTLDLRKEEEKEQKKHLIRAHAQVIRAALLFRLAGERELVISTAVSPPTPVGDYDIGLEQLVSMSKDQNISALQQYGGIRGLSNLIKSNPDKGISGDDADLLKRKNAFGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAAVSLALGIKTEGLAEGWYDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLNAEKQNIQLEVVRGGRTIKMSIFDIVVGDVIPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVHKDHKTPFLMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGVVGLTVAVLVLAVLLGRYFSGHTKDLDGNVEFVAGKTSVSNVVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGSTKINPPDDSSKLHPKALSLINEGIAQNTTGNVFVPKDGGETEVSGSPTEKAILSWAVKLGMNFDVIRSNSTVLHVFPFNSEKKRGGVALKLGDSGIHIHWKGAAEIVLGTCTQYLDSDGQLQSIEEEKSFFKDAIDDMAARSLRCVAIAYRSYELDKVPSSEQDLDQWSLPEHELVLLAIVGIKDPCRHGVKDAVKVCTGAGVKVRMVTGDNLQTAKAIALECGILASIEDAVEPNIIEGKKFRELSEKEREDIAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDDFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAITSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDRLMHRSPVGRREPLITNIMWRNLVVQAVYQIAVLLVLNFCGESILPKQDTRADDFQVKNTLIFNAFVLCQIFNEFNARKPDEMNVFRGVTKNKLFMGIVGVTFILQIIIIEFLGKFTSTVRLDWKLWLASLGIGFFSWPLAIVGKFIPVPKTPLARYFLKPIRRLKRSRSRATQ 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00050 1095 Pfam haloacid dehalogenase-like hydrolase 497 821 - -
Pumo7g00050 1095 MobiDBLite consensus disorder prediction 1 15 - -
Pumo7g00050 1095 Pfam Ca2+-ATPase N terminal autoinhibitory domain 48 91 IPR024750 GO:0005516
Pumo7g00050 1095 Gene3D - 208 1058 - -
Pumo7g00050 1095 PANTHER CATION TRANSPORTING ATPASE 101 1070 - -
Pumo7g00050 1095 SMART Cation_ATPase_N_a_2 156 230 IPR004014 -
Pumo7g00050 1095 PRINTS Sodium/potassium-transporting ATPase signature 619 637 - -
Pumo7g00050 1095 PRINTS Sodium/potassium-transporting ATPase signature 243 263 - -
Pumo7g00050 1095 PRINTS Sodium/potassium-transporting ATPase signature 493 514 - -
Pumo7g00050 1095 FunFam Calcium-transporting ATPase 208 265 - -
Pumo7g00050 1095 NCBIfam HAD-IC family P-type ATPase 774 888 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo7g00050 1095 NCBIfam HAD-IC family P-type ATPase 437 529 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo7g00050 1095 FunFam Calcium-transporting ATPase 256 376 - -
Pumo7g00050 1095 FunFam Calcium-transporting ATPase 824 1072 - -
Pumo7g00050 1095 Pfam Cation transporting ATPase, C-terminus 892 1067 IPR006068 -
Pumo7g00050 1095 SUPERFAMILY HAD-like 498 912 IPR036412 -
Pumo7g00050 1095 CDD P-type_ATPase_Ca_PMCA-like 182 940 - -
Pumo7g00050 1095 FunFam Calcium-transporting ATPase 59 115 - -
Pumo7g00050 1095 FunFam Calcium-transporting ATPase 9 plasma membrane-type 354 524 - -
Pumo7g00050 1095 PRINTS P-type cation-transporting ATPase superfamily signature 500 514 - -
Pumo7g00050 1095 PRINTS P-type cation-transporting ATPase superfamily signature 324 338 - -
Pumo7g00050 1095 PRINTS P-type cation-transporting ATPase superfamily signature 722 732 - -
Pumo7g00050 1095 PRINTS P-type cation-transporting ATPase superfamily signature 807 826 - -
Pumo7g00050 1095 PRINTS P-type cation-transporting ATPase superfamily signature 700 711 - -
Pumo7g00050 1095 PRINTS P-type cation-transporting ATPase superfamily signature 831 843 - -
Pumo7g00050 1095 SFLD Haloacid Dehalogenase 482 859 - -
Pumo7g00050 1095 Gene3D - 181 376 - -
Pumo7g00050 1095 FunFam Calcium-transporting ATPase 700 852 - -
Pumo7g00050 1095 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 507 704 IPR023299 GO:0000166
Pumo7g00050 1095 SFLD p-type atpase 482 859 IPR044492 -
Pumo7g00050 1095 Gene3D - 59 113 - -
Pumo7g00050 1095 ProSitePatterns E1-E2 ATPases phosphorylation site. 502 508 IPR018303 -
Pumo7g00050 1095 Coils Coil 642 662 - -
Pumo7g00050 1095 SUPERFAMILY Calcium ATPase, transduction domain A 278 373 IPR008250 -
Pumo7g00050 1095 Pfam Cation transporter/ATPase, N-terminus 159 225 IPR004014 -
Pumo7g00050 1095 Pfam E1-E2 ATPase 277 478 - -
Pumo7g00050 1095 SUPERFAMILY Calcium ATPase, transmembrane domain M 158 1070 IPR023298 -
Pumo7g00050 1095 Gene3D - 510 707 IPR023299 GO:0000166
Pumo7g00050 1095 MobiDBLite consensus disorder prediction 1 60 - -
Pumo7g00050 1095 NCBIfam calcium-translocating P-type ATPase, PMCA-type 147 1070 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pumo7g00050 1095 FunFam Calcium-transporting ATPase 510 707 - -
Pumo7g00050 1095 Gene3D - 497 852 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00050 Pumo-Chr7 703317 717707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00050 36 1091 Primary Pumps ATPases AT3G21180 77.578 0.0 1668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00050 K01537 - gmx:100777845 1998.79