Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00047 ATGGAAAACAAAGAGAATCTTGAAGCAGCCAGAAAGTGCTTGACAACTAGTTTGGAAACATCAAGCGTCATTGCCTCTGCATTAGATGAATCTGGATCAAGATTGGAGCTGCTAAACCAGAGATATCTGTCCTTGCAAGCTGCCCTTAGGCCCATCTCAATGCACAAGTGCACATTTGTCAACATTGACCACGGCATAGACAGTGTTCTATGTTCTGCTGCTGCAGTCCTCAAAGTTTCTGACTCTGTTCATCAGTTGGAGCATTCTCTCTTAACAGACCCCTCTTCTGATCTATACACCTATGTCTCAGACACAAAGAAGCTCGAGGAAGCACTGAAGCTTCTCACTGATAATTGCAGGTTAGCACTTGGCTGGTTGAAGGACGTTTTTGAGTTCTTACAAGACAAAGCAATCACCAATGAGCTTTACCTGTTGAATGTGAAGAAATCTTTGAGAATATTGCAAGAATTGCAGGTCAAGGAGGAAAGTGCTCGCCTTGATGGAGGCCTTCTTAGTACTGCTTTTGACAAGCTAGAACTTGAGTTCCACAGGCTTCTGATAGCAAACTCCGTGCCTCTTCCTTTGGTTTCATTGACATCACAGATTGGTCAGCAAGCCAGTATTGCCAAACAAGCTTTGCCATTGACAAGTTCTTTAGCAGGGAAGTTGCAAGCCATCATTGAGAGATTACATGCTAATGGCAGGCTAGACAAGTGTCAATCTATCTATGTTGAAGTTCGAGGTATGAATGCTCGTCGAAGCTTGAATACTTTAGATTTGAGTTACCTTGAGATTCCAACAGCCGAATTTGAGGCTGTACAGTGTATAGAGAGCTACATAGACCAATGGGGCAGCCATTTGGAGTTGGTTGTGGTGCAACTGCTCGAGACTGAGTGCAGGCTCTCTGCTATTGTCTTTGAGAAAATCGGTCCAGAAGCATGGATGGGGTGTTTTGCAAAGATTGCCATTGAATCAGGAATTCTTTCTTTTATTCGATTTGGAAGGATTGTTACTGAGAGGAAAAATGACCCCTTCAAGTTGTTGAACCTGCTGTCCATATTCAAGGTCTTAAATGGTCTAAGGCTAAAATTCAACCAGCTTTTCAGCGCGAAAGCTTGTAAAGAAATTAGAACTGTGACAGAGGATCTTATAAAAAAAGTAGTCAATGGTGCCAGTGAGATATTCTGGCAACTTCCAGCACAAGTGAAGTTGCAAAGGCCAACTTCTCCTCCCCCTGATGGCAGCGTTCCGAGGCTGGTAAGCTTTGTAACTGATTACTGCAATCAGCTGCTTGAGGATGCCTATAGGCCACATTTGACACAGGTTTTGGGAATACATCTTAGCTGGAGAAAGGAAGCGTACGAAGAGGGTCTTGTTTTATGCCAAATATATAACACAATTAAGGAGGTTGCGGTAAATTTGGATGCTTGGTCGAAGGCCTATGAAGATATCACATTGGCCTACCTTTTTATGATGAATAATCACTGTCATTTCTGCAATTTGAGGGGTACTGTGCTTGGAAATATGATGGGAGATTCTTGGTTAAAAGCACACGAGCAATATAAGGACTATTATGCAGCACTTTATTTGAGGAACGGCTGGGGAAAGCTTCTATCTATTCTTGTAGTTCAAAGGGACATACTTTCACCCTCCAGTGCAAGTGTGACAAGCCAAGACTTGGCAAAGAGACTAAATGCTTTCAATCTAGCTTTTGATGAAAGGTACAAGAAGCAATCTAATTGGGTAATCTCCGATGAGATCTTGAGGGAAAATGTATGCAAGCATTTGGTGGAAGGTATTATACCAATTTATAGGGCCTATGTCAAGAATTATTGTTTGTCAATCGAAAATGATGCTAAGGTTGACAAGCATATGAAATATACGGCGCAGAGTTTGGAGAACAAGATTAGGTCTCTGTTTCAGCCCAAGCAGAAGAAGGGTAGTACCATTAAACAGGCAGACTTGATTAGTAAAATAAAAGAAGTCAGTCATCAGTTTCGCTTGATTCTAGCTGCACTATAA 2022 0.4199 MENKENLEAARKCLTTSLETSSVIASALDESGSRLELLNQRYLSLQAALRPISMHKCTFVNIDHGIDSVLCSAAAVLKVSDSVHQLEHSLLTDPSSDLYTYVSDTKKLEEALKLLTDNCRLALGWLKDVFEFLQDKAITNELYLLNVKKSLRILQELQVKEESARLDGGLLSTAFDKLELEFHRLLIANSVPLPLVSLTSQIGQQASIAKQALPLTSSLAGKLQAIIERLHANGRLDKCQSIYVEVRGMNARRSLNTLDLSYLEIPTAEFEAVQCIESYIDQWGSHLELVVVQLLETECRLSAIVFEKIGPEAWMGCFAKIAIESGILSFIRFGRIVTERKNDPFKLLNLLSIFKVLNGLRLKFNQLFSAKACKEIRTVTEDLIKKVVNGASEIFWQLPAQVKLQRPTSPPPDGSVPRLVSFVTDYCNQLLEDAYRPHLTQVLGIHLSWRKEAYEEGLVLCQIYNTIKEVAVNLDAWSKAYEDITLAYLFMMNNHCHFCNLRGTVLGNMMGDSWLKAHEQYKDYYAALYLRNGWGKLLSILVVQRDILSPSSASVTSQDLAKRLNAFNLAFDERYKKQSNWVISDEILRENVCKHLVEGIIPIYRAYVKNYCLSIENDAKVDKHMKYTAQSLENKIRSLFQPKQKKGSTIKQADLISKIKEVSHQFRLILAAL 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00047 673 Pfam Exo70 exocyst complex subunit 282 637 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo7g00047 673 Gene3D Exocyst complex component Exo70 134 648 - -
Pumo7g00047 673 SUPERFAMILY Cullin repeat-like 76 640 IPR016159 -
Pumo7g00047 673 PANTHER EXOCYST COMPLEX PROTEIN EXO70 109 640 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00047 Pumo-Chr7 680140 682450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00047 5 660 EXO70 exocyst subunit family AT4G31540 51.051 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00047 K07195 - gmx:121175138 1224.54