Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00022 ATGAGTTATTTGCCGACCATCCTCTTGAGATTCACAGAGCATCAATCTCAACATACAAGGCTAATTAAGCAGATGATGGATTCAAAGAAGTGTAACAAGATCAGAGAGGTGGTTAGGCTTCAACAAATCCTCAAGAAGTGGAAGAAAGTTGCAACTGCTTCCAACAACACCAGCACTAGCAGTAGCAGTAGCAGTAAAGGCATCAAGTTTTTAAAACGAACCCTTTCATTCACAGATGTTTCTTCCACCAATGACATCGTTCCAAAAGGGTTCCTCGCTGTTTGTGTAGGGAAAGAGCTCAAGAGATTCATTATTCCCACAGATTACTTGAGACACCAAGCATTTGAGATGTTGCTCCAAGAAGCAGAAGAGGAATTTGGTTTCCAGCAAGAGGGTGTGCTCAAAATCCCATGCCAAGTATCAGTGTTCGAGAAAATATTGAAGGCTGTGGAAGACAACAAAGAACCCTTGCATGACTTTGGGTTCAACGCGTCAGATTGTGAAGTTACTTCCCCTCATCATGCTCAAACGTGTAGATAG 540 0.4241 MSYLPTILLRFTEHQSQHTRLIKQMMDSKKCNKIREVVRLQQILKKWKKVATASNNTSTSSSSSSKGIKFLKRTLSFTDVSSTNDIVPKGFLAVCVGKELKRFIIPTDYLRHQAFEMLLQEAEEEFGFQQEGVLKIPCQVSVFEKILKAVEDNKEPLHDFGFNASDCEVTSPHHAQTCR 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00022 179 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 58 146 IPR003676 GO:0009733
Pumo7g00022 179 Pfam Auxin responsive protein 45 149 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00022 Pumo-Chr7 450925 451464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00022 26 178 Calmodulin-binding Proteins AT2G24400 56.287 1.49e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00022 K14488 - gmx:100782489 256.144