Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00013 ATGTGGCTTCCAAGTACAAAGACATCAGTAATTAAAAAGGGAGGAGGAGGAGGAAATGGATTGGTGGCAGTTGCTATAGAAAAGGATAACAAAGGGAGCAGACATGCTCTCAAATGGGCTGCTGATACTCTTCTTTCCAGAGGCCAAACTCTTGTTTTAATCCACGTCTTGCAGCACACCACCTCCCCATCTCTTTCTAGCAGCCAGGCCATAGTATGCAACACCAACCCCCCAGATGCATCTCCAGAGAGAGACCAACTTGTCAATATTACAAAGGATCTATTCCGCACCTTCCATTGCTATTGTTCACGCAAAGATGTATGTATGTATGTAACTTATTTATTCTTTTCAAATTGCTTGCTTACCGCTGCTAAATATTTATTTCATCAGATACGGTGCCTTGATGTCCTTCTTGAAGACATGGATGTGGTGAAAGGAATAACAGAATATGTCTCTTATGCTGCAATTGAGAATTTGGTGCTTGGTGCAGCGTCCAGGCATGGCTTTATTAGGTATCTACAATTCAAGTCAAGTACACCAAGCAGCATATTAAAGGGGGCGCCGGATTTCTGTACTGTGTATGTGATTTCTAAGGGGAGAATCTCCTCAGTTCGGAGTGCTGCTCGAACAGCTCCACATGCCTCCCCATTGCTGAGGCATATACAGATTCTAAATGATGAGAATGCAAATGAATCTGAGATATCCTCTAAATGTATGAGCTTCAGAGGTTTCCGGTCACAATTTGACAGAAGAATAGGCTTGAGTGGAAGGTCATGCATGGACTTCACCGAATCTGACACTGACATTTCATTTGTAAGCTCTGAGAGGCCCAGCAGTGTGCGTTCATCCTCTGTTTTCTATGACTATATTGATTGTGCCCGAAATTCACGAACTTCAACCAGTTCAGATCGTAGCTTGGGATCAACCCGTTTGAGACCCAAGTTCACTGACCTCAGTTCACCAGACATTTCATTTTCAGAGGAAAGCACCCGATCATCATTTTCTTCTTCGTTACAAAACATTGATGAAGTAGAAGCTGATATGAGGAGGTTGAAGTTGGAGTTAAAGCAAACAATGGAAATGTACAGTACTGCATGCAGAGAAGCACTAACAGCACAACAGAAGTTAGTGGAACTGCACAACTGGAGAATTGAGGAAGAAAAGAAATTAGAGGAGGCACAGCTGTCACAGGAAGCAGCAGAGGCAATTGCAGAGCAAGAGAAAGCAAGAAGTAAAGCAGCGAGAGAAACAGCTGAAGCCGCTAAGAGAATTGCAAGGGTGGAATCAAATAAAAGAGAAAGTGTTGAACTGAAAGCTCTTAGAGAAGCAGAGGAAATGAGGAAACTATTGGATAATCTAACCCAAACTGATAAAAGATATAGGAGATACACAATTGAGGAGATTGAAGCGGCCACAGACAAGTTTTCTGAATCTCGAAAAATAGGGGAAGGGGGGTATGGCCCTGTGTATAAGTGTTACCTTGATCACACTCAAGTGGCTGTCAAGGTTCTGCGTCCAGATTCTGCTCAAGGGAAGTCTCAGTTTCAGCAAGAGGTGAACATACTGGGGTGCATACGGCATCCAAACATGGTGCTTCTTGTAGGAGCTTGTCCAGAGCATGGCATACTGATTTATGAATATATGGCGAATGGAAGCTTGGAAGATTGTCTGTTTGGAAAGAAGAGTCCGAGTCCGAGTCCGAGTCCGATGATGATGTGTTGGCAGGTGAGGTTTGGAATAGCTGCAGAGATAGGGACGGGTTTACTGTTCCTCCATCAGACAAAGCCTGAACCGTTGGTGCACCGTGATCTGAAACCGGGAAATATTTTACTAGACCACAATTACGTGAGCAAGATTAGTGATGTTGGATTGGCGAGACTTGTCCCTGCTGCTGTTGCTGAGAATGTGACACAATGCCGGATGACTTCGGCAGCTGGAACATTCTGCTATATTGATCCGGAGTATCAGCAAACAGGAATGCTTGGCGTGAAGTCTGATGTGTATTCTCTGGGGATCATTCTTCTTCAATTATTGACCGGTAGGCCCGCAATGGGGTTGGCTCACCAGGTTGAAGAGTCCATTGAGAACGACACCTTTTCTGAAATGCTTGATCCATCTGTCCCGGACTGGCCTCTCGTACAAGCCTTGTGCCTTGCAAACTTGGCACTCCAATGTGCACAACTCAGACGCAAGGACCGCCCAGACCTTGCCACAGTTGTATTGCCTCAGCTCCAAATCTTGAGAGACTTTGCCCAACAGAACACCACCACTCAGCAGCCTTCTTCCATGCCCATGCAACAGGATGTGGTCAGCGAACCGAGGTCTGAACATTCTGGAAGCACCAGAAGCCCATCAACCCCATCAACGCCAACAACAGATCAAGGAAAAGAAGAAGGTATTAATGATATGATATGA 2415 0.4505 MWLPSTKTSVIKKGGGGGNGLVAVAIEKDNKGSRHALKWAADTLLSRGQTLVLIHVLQHTTSPSLSSSQAIVCNTNPPDASPERDQLVNITKDLFRTFHCYCSRKDVCMYVTYLFFSNCLLTAAKYLFHQIRCLDVLLEDMDVVKGITEYVSYAAIENLVLGAASRHGFIRYLQFKSSTPSSILKGAPDFCTVYVISKGRISSVRSAARTAPHASPLLRHIQILNDENANESEISSKCMSFRGFRSQFDRRIGLSGRSCMDFTESDTDISFVSSERPSSVRSSSVFYDYIDCARNSRTSTSSDRSLGSTRLRPKFTDLSSPDISFSEESTRSSFSSSLQNIDEVEADMRRLKLELKQTMEMYSTACREALTAQQKLVELHNWRIEEEKKLEEAQLSQEAAEAIAEQEKARSKAARETAEAAKRIARVESNKRESVELKALREAEEMRKLLDNLTQTDKRYRRYTIEEIEAATDKFSESRKIGEGGYGPVYKCYLDHTQVAVKVLRPDSAQGKSQFQQEVNILGCIRHPNMVLLVGACPEHGILIYEYMANGSLEDCLFGKKSPSPSPSPMMMCWQVRFGIAAEIGTGLLFLHQTKPEPLVHRDLKPGNILLDHNYVSKISDVGLARLVPAAVAENVTQCRMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIILLQLLTGRPAMGLAHQVEESIENDTFSEMLDPSVPDWPLVQALCLANLALQCAQLRRKDRPDLATVVLPQLQILRDFAQQNTTTQQPSSMPMQQDVVSEPRSEHSGSTRSPSTPSTPTTDQGKEEGINDMI 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00013 804 Coils Coil 334 361 - -
Pumo7g00013 804 Gene3D Transferase(Phosphotransferase) domain 1 548 770 - -
Pumo7g00013 804 Gene3D HUPs 21 200 IPR014729 -
Pumo7g00013 804 ProSiteProfiles Protein kinase domain profile. 475 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00013 804 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 30 195 - -
Pumo7g00013 804 Gene3D Phosphorylase Kinase; domain 1 446 547 - -
Pumo7g00013 804 Coils Coil 385 424 - -
Pumo7g00013 804 SMART serkin_6 475 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00013 804 CDD STK_N 21 199 - -
Pumo7g00013 804 SUPERFAMILY Protein kinase-like (PK-like) 457 743 IPR011009 -
Pumo7g00013 804 MobiDBLite consensus disorder prediction 753 804 - -
Pumo7g00013 804 PANTHER OS02G0152300 PROTEIN 22 781 - -
Pumo7g00013 804 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 447 547 - -
Pumo7g00013 804 MobiDBLite consensus disorder prediction 753 796 - -
Pumo7g00013 804 Pfam Protein kinase domain 476 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00013 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Pumo7g00013 804 Coils Coil 436 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00013 Pumo-Chr7 379075 382557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00013 1 754 Receptor kinase-like Gene Family AT1G78940 55.019 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pumo7g00013 Pkinase 1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00013 - - gmx:100818471 1055.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04425 4 85318540 85323183 Pumo7g00013 7 379075 382557 PCT