Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00011 ATGCACCACAACCTTAACCTTGCAAGGTTGTGGATTGCTTTGCTTGCGGTCTCAACCACCGTAGTTCATTGCAAAACTGCCTCCCAAGATGTTTCAGCCCTTAATGTGATGTATACAAGCTTAAATTCCCCTTCAAAGCTGAGTGGCTGGAAATCAAGTGGAGGTGATCCGTGTGGCGACTCTTGGGAAGGAATCAAATGCTCAGGCTCTTCTGTCACAGAAATTGATTTGAGCAACAACAACCTCAAGGGTGATATACCATATCAACTTCCTCCAAATGCTCGTTATATAGATCTTTCTAAGAACGACTTCACTGGAAGTATACCTTATTCCTTCTCTCAGATGGGTGACCTCAACCACCTAAATCTTGCACATAATCAGCTCAAAAACCAGTTGGGCGATATGTTTGGGAAGCTCAGTAAACTTAAACAACTGCACCTACAAAACAACCAATTAACTGGTTCAGTAAATGTCCTTGCCAACCTTCCACTTGAAGATTTGAATGTTGAAAACAACAAATTTACTGGTTGGGTTCCTGAGGAGTTAAAGGATATAAATAGCTTGCAAACTGGAGGAAATTCTTGGTCAAGTGGACCAGCACCTCCTCCTCCTCCTGGTACTCCCCCTATCAAGCATTCCGAGAAAAAGAATGATAAATCTGTTATTAGTGGAGTAGCTATAGCAGGCATAGCTTTTGGCATACTAGCAGTAATTATAATTATTGTTGCTCTTTCTAAAAGAAGGTCATCGACACCTTCTTCACATTTTATCGATGAAGAGAGGCGTAGCCAGCATAGATCTTTTACACCCCTTGCATCTCAGGAGTTATCAAAAGAACCGGGCGCTGATGTCAGCAAAGACTACAGAGGATTTAAGTCAATGGATTCTACTTCAATTGACGTAAAGGCTTTGCAAAAATCTCCATCAATTGGTGTTAGGTCGTCAGTCTCCGATTGTGTGCAATCTTTTAATGACAACGAATTTGCAAATCGTCTAAATGCTAGAAGAAGTACATCAATCCGTGTTACTACTTTTTCACAGGCAGAGTTGCAGTCTGCTACTGCTAATTTTGCTTCAGGTAGACTTCTTGGTGAAGGATCCATAGGATGTGTTTATCGGGCTAAATATGCTGATGGAAAGGTATTGGCTGTAAAAAAAATCAACCCTTCGCTTTTCCATGGTGGTCCTCCCGAGGAATTCTCTCAGATTGTTTCAAACATCAGCAAACTTCACCACCCAAATATTGTTGAGCTTGTCGGTTATTGTTCGGAACCGGAGCACATGTTAATATATGATTATTTCAGAAATGGTTCTCTCCATGACTTTTTACACTTATCAGACGACTTCAGCAAACCACTAACTTGGAACACCAGAGTCAGAATTGCAATGGGAGCAGCTCGGGCTGTTGAGTTTCTACATGAAATTTGTTCTCCTCCTTTATTGCACAAGAATATTAAGTCTTCCAATATTTTGCTTGACACGGATCTGAATCCTCGTCTCTCAGACTATGGTTTGGCATCCTTCCACCAGCGTACTAGCCAAAATCTTGGGGCAGGATATAATGCACCAGAATGCACAAAACCTTCAGCCTATACGCAGAAGAGTGATGTATACAGTTTTGGAGTAGTCATGCTGGAACTTTTGACAGGTCGAATGCCTTTAGACAGTTCAAAGCCAAAAGCAGAACAATGTCTGGTTCGTTGGGCCACCCCACAGCTTCATGACATTAATGCGGTGGAAAAAATGGTGGACCCTGCCTTGCGGGGGCTTTACCCTCCTAAGTCACTATTCCGATTTGCTGATATCATCGCCCTCTGTGTTCAGTCTGAGCCTGAATTTCGGCCACCTGTGTCAGAGTTAGTTCAGTCTTTGGTGCGATTAGTTCAACGTTCAAGTATGACAATGAGGGAGGATTTTGAGTGA 1923 0.4238 MHHNLNLARLWIALLAVSTTVVHCKTASQDVSALNVMYTSLNSPSKLSGWKSSGGDPCGDSWEGIKCSGSSVTEIDLSNNNLKGDIPYQLPPNARYIDLSKNDFTGSIPYSFSQMGDLNHLNLAHNQLKNQLGDMFGKLSKLKQLHLQNNQLTGSVNVLANLPLEDLNVENNKFTGWVPEELKDINSLQTGGNSWSSGPAPPPPPGTPPIKHSEKKNDKSVISGVAIAGIAFGILAVIIIIVALSKRRSSTPSSHFIDEERRSQHRSFTPLASQELSKEPGADVSKDYRGFKSMDSTSIDVKALQKSPSIGVRSSVSDCVQSFNDNEFANRLNARRSTSIRVTTFSQAELQSATANFASGRLLGEGSIGCVYRAKYADGKVLAVKKINPSLFHGGPPEEFSQIVSNISKLHHPNIVELVGYCSEPEHMLIYDYFRNGSLHDFLHLSDDFSKPLTWNTRVRIAMGAARAVEFLHEICSPPLLHKNIKSSNILLDTDLNPRLSDYGLASFHQRTSQNLGAGYNAPECTKPSAYTQKSDVYSFGVVMLELLTGRMPLDSSKPKAEQCLVRWATPQLHDINAVEKMVDPALRGLYPPKSLFRFADIIALCVQSEPEFRPPVSELVQSLVRLVQRSSMTMREDFE 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00011 640 ProSiteProfiles Protein kinase domain profile. 357 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00011 640 MobiDBLite consensus disorder prediction 188 216 - -
Pumo7g00011 640 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 322 433 - -
Pumo7g00011 640 Gene3D Phosphorylase Kinase; domain 1 317 433 - -
Pumo7g00011 640 Pfam Leucine rich repeat 92 152 IPR001611 GO:0005515
Pumo7g00011 640 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Pumo7g00011 640 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 434 638 - -
Pumo7g00011 640 FunFam Leucine-rich repeat receptor-like kinase 29 135 - -
Pumo7g00011 640 Gene3D Ribonuclease Inhibitor 26 200 IPR032675 -
Pumo7g00011 640 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 628 IPR046959 -
Pumo7g00011 640 ProSiteProfiles Leucine-rich repeat profile. 141 163 IPR001611 GO:0005515
Pumo7g00011 640 SUPERFAMILY L domain-like 27 188 - -
Pumo7g00011 640 MobiDBLite consensus disorder prediction 252 266 - -
Pumo7g00011 640 MobiDBLite consensus disorder prediction 252 286 - -
Pumo7g00011 640 Pfam Protein tyrosine and serine/threonine kinase 360 624 IPR001245 GO:0004672|GO:0006468
Pumo7g00011 640 SUPERFAMILY Protein kinase-like (PK-like) 337 624 IPR011009 -
Pumo7g00011 640 Gene3D Transferase(Phosphotransferase) domain 1 434 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00011 Pumo-Chr7 325756 334202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00011 7 639 Strubbelig Receptor Gene Family AT1G78980 57.726 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pumo7g00011 PK_Tyr_Ser-Thr 5.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00011 - - gmx:100785529 1050.81