Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00002 ATGCCCTCTTTCTCTTTCCCTTCAATTTTGAAGGATATGGGAACATATCTTCATCACAAAGAAATCAAAGCTGCAATGGGTGTAAAAATCACTGCCCAGGGGCTTGAACATGCCATTGCTGGCACTGATTTATATGTTGTGAAGCCTGATGATGATTTGGAAGACGTTAAAGAAGCAGCCATGGAATATATGCGGTCAGTCATGTTCAGGATTGATTGGGCCAGCGAAGGTGTTTGTGTACAGGCTTCTACCCTTGGCTCCTTGGAAGCATTACTGGAGTTTTCGAAAACTGGTCCATACATGGGTATCCCTGTTAGAGGTATAAGCATAGGCCCTGTACATAAAAAGGATGTAATGAAGGCCAGTGTAATGCTTCAAAAGAATAAAGAGTTTGCAGCAATATTGGCATTTGATGTCGAAGTTACTCCTGAGGCTAGGGAACTGGCAGATGAATTGGGCGTGAAGATATTCGTTGCTGATGTCATTTATCATCTGTTCGATCAATTTGAAGCTTATATGTCACAGCATGGAGAAAAAGAGAGAAGCTGCTGA 552 0.4221 MPSFSFPSILKDMGTYLHHKEIKAAMGVKITAQGLEHAIAGTDLYVVKPDDDLEDVKEAAMEYMRSVMFRIDWASEGVCVQASTLGSLEALLEFSKTGPYMGIPVRGISIGPVHKKDVMKASVMLQKNKEFAAILAFDVEVTPEARELADELGVKIFVADVIYHLFDQFEAYMSQHGEKERSC 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00002 183 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 11 179 IPR015760 -
Pumo7g00002 183 Gene3D Translation factors 7 71 - -
Pumo7g00002 183 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 53 180 IPR036925 -
Pumo7g00002 183 FunFam Eukaryotic translation initiation factor 5B 70 177 - -
Pumo7g00002 183 Pfam Translation-initiation factor 2 57 170 IPR023115 -
Pumo7g00002 183 SUPERFAMILY Translation proteins 14 47 IPR009000 -
Pumo7g00002 183 Gene3D - 72 177 IPR036925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00002 Pumo-Chr7 151815 152830 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00002 10 172 Eukaryotic Initiation Factors Gene Family AT1G76810 73.620 1.21e-73 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00002 K03243 - gmx:100814640 270.396