Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo79g00008 ATGGACAGCGTAGAAGAAGAAACCCTACTCACCGAATTCGACTGGGAAAAATTCCTCGATGACATACCCGAATTCGGCGTCGATGATTTTTTGCAGGACGACACCGTTCCTGTTGTTACCGACAATCCCTCCCCGAACGACCCCGTTTTGTGCGAGATCGAGAGCATGCTCATGAAACAGGCGGAAAACGACGTCGTTTTCTTCCCCGAGACCCCGTCGTCGGAGGCCGAGTACTACAAGCTCTTCGAGGAGATTCTGGTGGAGCCCGAGGAAGGACCCGAGAGCCAGCGTTCCAAGACAGAGTCCGAGGAGGGCTCCGACAAGGACAAGATCGATGACGCTGCTCCCGATGAACCCATGTCCAAGAAATTAAAGAGGCAATTGAGGAACAGGGATGCTGCCGTTAGATCCAGGGAGAGGAAGAAGTTGTATGTGAAAAATCTTGAGATGAAGAGTAGGTACTTAGAAGGGGAATGCAGAAGACTGGGGCATTTGCTCCACTGCTGCTATGCTGAGAACAACGCTTTGCGGCTTTGCTTGCAATCGCATGGCGCATATGGTGCTTCCATGACCATGCAGGAGTCTGCTGTGCTCTTGTTGGAACCTCTGCTGTTGGGTTCCCTGCTGTGGTTAATGGGCATCATGTGCCATCTCAGTCTGCCCCTAATGCTGTGCCTCACAGCAGTACTTCCAAGAGAAAACATCGAACAGAAGGGCCTAAGAAGGGTAACTCAAAAAGGACCAGAAAGTAAGATCTCTGAGTGTTTCCAGATGCATTCTTTTGTAAAGAGTAGAAGATGCCGAGCATCAAGAACAAAGATGAAATTCAATTTTATGATGTTCTAA 846 0.4953 MDSVEEETLLTEFDWEKFLDDIPEFGVDDFLQDDTVPVVTDNPSPNDPVLCEIESMLMKQAENDVVFFPETPSSEAEYYKLFEEILVEPEEGPESQRSKTESEEGSDKDKIDDAAPDEPMSKKLKRQLRNRDAAVRSRERKKLYVKNLEMKSRYLEGECRRLGHLLHCCYAENNALRLCLQSHGAYGASMTMQESAVLLLEPLLLGSLLWLMGIMCHLSLPLMLCLTAVLPRENIEQKGLRRVTQKGPESKISECFQMHSFVKSRRCRASRTKMKFNFMMF 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo79g00008 281 CDD bZIP_HY5-like 123 173 - -
Pumo79g00008 281 SMART brlzneu 118 182 IPR004827 GO:0003700|GO:0006355
Pumo79g00008 281 SUPERFAMILY Leucine zipper domain 122 178 IPR046347 GO:0003700|GO:0006355
Pumo79g00008 281 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 6 252 - -
Pumo79g00008 281 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 125 140 IPR004827 GO:0003700|GO:0006355
Pumo79g00008 281 Gene3D - 121 179 - -
Pumo79g00008 281 MobiDBLite consensus disorder prediction 89 135 - -
Pumo79g00008 281 Pfam bZIP transcription factor 121 162 IPR004827 GO:0003700|GO:0006355
Pumo79g00008 281 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 120 162 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo79g00008 135 281 bZIP Transcription Factor Family AT1G42990 48.649 3.08e-17 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo79g00008 bZIP_1 1.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo79g00008 - - gmx:778132 437.573