Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03272 ATGTGGAAGCTCAAGTTCGCCGAGGGAGGGAGTCCATGGCTTCGAACATTGAACAATCACGTTGGCAGACAGGTGTGGGAGTTCGATCCTAATCTTGGATCGCCGCAAGATCTCCTCGAGATTGAGAAAGCTCGCCAGAATTTCCATGATAATCGCTTTACCAACAAGCACAGCTCTGATCTACTTATGCGCATGCAGTTTGCAAGAGAGAACCCAATACGTGAAGTCTTACCCAAAGTCGGAGTTAAAGGTACCGAGGATGTGACCGAAGAGATTGTGACAAGAACATTAAGAAGGGCCGTAAGTTTCCATTCAACTCTCCAGAGTTATGACGGACACTGGCCGGGAGATTATGGAGGTCCCATGTTTCTGATGCCTGGCTTGGTAATTGCTCTGTCTATCACTGGGGCACTGAATGCAGTCTTAACTGAAGAACATAGAAAGGAAATTTGCCGTTACCTCTATAATCATCAAAACAAGGATGGTGGGTGGGGTTTGCATATTGAAGGTCCAAGCACCATGTTTGGCTCTGTCTTGAGTTATGTTACTCTGAGATTGCTAGGTGAGGGACCTAATGATGGACAAGGGGAAATGGAGAAGGCACGTGACTGGATTCTAGGGCATGGCGGTGCTACTTATATAACGTCGTGGGGGAAGATGTGGCTTTCAGTACTTGGAGTGTATGAATGGTCTGGAAATAATCCCCTGCCCCCTGAGATATGGCTCCTTCCATACATGATTCCATTTCATCCAGGAAGGATGTGGTGTCACTGCCGGATGGTCTATTTGCCGATGTCCTACTTATATGGCAAGAGATTTGTTGGCCCAATCACACCAACAGTATTATCTTTGAGAAAAGAGCTTTATACCTGTACCATATCATGA 885 0.4633 MWKLKFAEGGSPWLRTLNNHVGRQVWEFDPNLGSPQDLLEIEKARQNFHDNRFTNKHSSDLLMRMQFARENPIREVLPKVGVKGTEDVTEEIVTRTLRRAVSFHSTLQSYDGHWPGDYGGPMFLMPGLVIALSITGALNAVLTEEHRKEICRYLYNHQNKDGGWGLHIEGPSTMFGSVLSYVTLRLLGEGPNDGQGEMEKARDWILGHGGATYITSWGKMWLSVLGVYEWSGNNPLPPEIWLLPYMIPFHPGRMWCHCRMVYLPMSYLYGKRFVGPITPTVLSLRKELYTCTIS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03272 294 FunFam Lupeol synthase 50 224 - -
Pumo6g03272 294 Pfam Squalene-hopene cyclase N-terminal domain 98 289 IPR032697 -
Pumo6g03272 294 Gene3D - 118 293 - -
Pumo6g03272 294 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 291 IPR018333 GO:0005811|GO:0016104|GO:0016866
Pumo6g03272 294 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 120 290 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03272 Pumo-Chr6 75774865 75777526 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03272 K01853 - gmx:548054 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02393 8 61115878 61117431 Pumo6g03272 6 75774865 75777526 PCT