Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03250 ATGAGGCAAAAGGATTGTTATAGAAAGAAAGGTTGGTGTGGGAAGGTGATGGTGGTTGCAGTTGAAGCAACCAAAGAGGTTTCAAGGAGTGCTTTGGTGTGGACATTGACTAATGTTGCTCAACCAGGGGATTGTATTAAGCTGTTGGGTGTCATTCCCACTATCTGCTCAAACCACACTGATTGTATCACTACTCAGTGGAGATCCCCTTTAGGAACCATCTCAGATCAGAGAGAAGTTTGTCTAAATTCCTGCTCCCAAATGGTGCTTCAACTTCATGAATTATATGATCCAGAGAAGATAAAGATTAGAATAAAAATTCTTTCTGGTTCTTTACATGGAGCAGTGGCTGCTGAAGCCAAGAGAGCCCAATCAAGCTGGGTAATATTAGACAAAAAATTGAAAAAGGAAAAGAAATACTGCATGGAGGAGCTGAGTTGCAGTGTTGTAATCATAGAGCGATCTCGGCCAAACGTTCTGCGATTGAATTTGATCGGTCCAACAAATATGGAGCAGAATGCATTTCCTAGAAACATCAAAGGCAAGTCTGAACATGCAGATACAATTAGAGGTCCAGTTGTTGCTACTCCTGCTAGTAGTCTAAAACAAGGGTCAAACATGACTACAAGTATCGTTGGAACATCATCTACACCTGGGACTGTGACTTCACCATTTTATCAATATGATAATGATGAAGGACGAAGAAGAGGCTTTCCCTTTTCTCACAAGGAGCCGAAAAATCTGGAGGAAGGTGAATCCAATTCAGAGAGTGAAATTATTTTGAGTCTGTCATCCACTAGTTCATATTTTCAGCCATGGATTTCAAATGCAATTTGTGTTGATGACGAGTTTTCAAAACACAAGAGCATTAACGAGGCTTTGGTTTGTCCTAGCGAAGCATTGGTTCAGAAATTGGACCATGATCCTATCTTAGGAGTGCTTAATTGTAAACTTGATGTGAACTTAAGAAGAAGTGTCCCAAATGCCACTCCCCCATTGTGCTCTATTTGTCAGCATAAGGCACCTTTGTTTGGGAACCCTCCAAGATGGTTTACATTTGCTGCACTGCAACTTGCCACTGATGGATTTTCACAGGAAAATTTTTTGGCTGAAGGTGAGTTTGGTTCTGTACACCGTGGAGTCCTACCTGATGGGCAAGTAGTTGCTATCAAGCAGTACAAGTTAGCTGGTGGTACTCGAGGGGATGAAGATTTTTGGTCAGAAGTAGCGGTTTTAAGCTGTACACAACATCGTAATGTTGTGATGTTAATTGGGTTTTCTGTGGAGGATGGAAGAAAATTGTTGGTTTGTGAATATGCCTGCAATGGATCTCTATATTCTCATCTTCATGGACAAAATCAAAATTTATTGGATTGGTCTGCACGTCAAAAAATTGCAGTAGGGGCAGCTCGTGGTTTGAGGTACCTTCATGAAGAATGTAGAGTGGGTTGTATTGTGCACCGCGACATGAGGCCTAGTAATATCTTCCTTACTCATGACTTTGATGCATTAGTACGTCCATTTATATATTCTTTAATTTTACATTGTTCGATATATTTTTTTATCGCAATTAGCAACTTCATTTTAGTCCTTTTTCTTTTGTTTTTCCTACATCTTATTAGACTTTTATGTTAG 1635 0.3994 MRQKDCYRKKGWCGKVMVVAVEATKEVSRSALVWTLTNVAQPGDCIKLLGVIPTICSNHTDCITTQWRSPLGTISDQREVCLNSCSQMVLQLHELYDPEKIKIRIKILSGSLHGAVAAEAKRAQSSWVILDKKLKKEKKYCMEELSCSVVIIERSRPNVLRLNLIGPTNMEQNAFPRNIKGKSEHADTIRGPVVATPASSLKQGSNMTTSIVGTSSTPGTVTSPFYQYDNDEGRRRGFPFSHKEPKNLEEGESNSESEIILSLSSTSSYFQPWISNAICVDDEFSKHKSINEALVCPSEALVQKLDHDPILGVLNCKLDVNLRRSVPNATPPLCSICQHKAPLFGNPPRWFTFAALQLATDGFSQENFLAEGEFGSVHRGVLPDGQVVAIKQYKLAGGTRGDEDFWSEVAVLSCTQHRNVVMLIGFSVEDGRKLLVCEYACNGSLYSHLHGQNQNLLDWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPSNIFLTHDFDALVRPFIYSLILHCSIYFFIAISNFILVLFLLFFLHLIRLLC 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03250 544 ProSiteProfiles Protein kinase domain profile. 363 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g03250 544 ProSitePatterns Tyrosine protein kinases specific active-site signature. 485 497 IPR008266 GO:0004672|GO:0006468
Pumo6g03250 544 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 335 439 - -
Pumo6g03250 544 Gene3D Phosphorylase Kinase; domain 1 334 439 - -
Pumo6g03250 544 Gene3D Transferase(Phosphotransferase) domain 1 441 517 - -
Pumo6g03250 544 PANTHER OS01G0750732 PROTEIN 251 506 - -
Pumo6g03250 544 MobiDBLite consensus disorder prediction 232 255 - -
Pumo6g03250 544 MobiDBLite consensus disorder prediction 232 253 - -
Pumo6g03250 544 SUPERFAMILY Protein kinase-like (PK-like) 343 505 IPR011009 -
Pumo6g03250 544 Pfam Protein tyrosine and serine/threonine kinase 366 500 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03250 Pumo-Chr6 75506311 75509407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03250 322 520 Trihelix Transcription Factor Family AT1G68690 45.000 1.01e-47 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pumo6g03250 PK_Tyr_Ser-Thr 1.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03250 - - vun:114182477 696.427