Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03243 ATGGGTCGGCGAAAGAACAGCAGCAACAATCAGTGCTCCTCAAGCAAGGAAGACGCTAACATGAATAACCACCTTATCTTTGAAGATGCTGACGAGGCTGTCGACGAGAGTTCCAACCTCGACCAATCCATGTGCGACATCGACGAATCCGATGATAAAACCAGCGCCGACTATTACTTCGATTCCTACTCTCATTTTGGAATTCACGAAGAAATGTTGAAGGACACTGTAAGAACTAAGACATATCAAAATGTTATTTATCAGAATAAGTTTTTGTTCAAGAATAAAGTAGTTCTTGATGTTGGAGCTGGGACTGGGATTTTATCACTATTTTGTGCCAAAGCAGGGGCAGAACATGTCTATGCAGTTGAGTGCTCCCATATGGCTGACATGGCGAAGGAGATTGTTGAAGCTAATGGTTACTCTAATGTTGTAACCGTTCTGAAGGGGAAGATTGAAGAAATTGAACTTCCAGTTGCTAAAGTTGATATAATTATTTCAGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCCGTGCTCTATGCACGTGACAAATGGCTTGTGGATGGTGGAGTTGTGCTACCAGACAAAGCATCCCTCTATCTCACTGCCATTGAAGATGCTGACTATAAAGAAGATAAAATTGAGTTTTGGGACAAAGTATATGGATTTGACATGAGCTGCATCAAGAAGCAAGCCATAATGGAGCCTCTTGTTGACACAGTTGACCAGAATCAGATTGCTACAAACTGCCAGCTACTCAAGACAATGGATATCTCAAAGATGGCTCCTGGAGATGCTTCATTCACAGCACCCTTTAAGCTTGTAGCTGAACGTGACGACTATATTCACGCTCTTGTTGCATATTTTGATGTATCATTTACAAAGTGTCATAAATTGATGGGCTTCTCCACAGGGCCAAGATCACGAGCTACACATTGGAAACAAACAGTCCTATACCTGGAAGATGTCTTGACCATTTGTGAGGGGGAGGCAATTGTGGGGAGCATGACTGTTGCTCCAAATAAAAAAAATCCTCGTGATGTTGATATAATGCTCAAGTATTCATTGAATGGAAGGCGATGCAATGTTTCCAGGGTTCAGTACTACAAGATGCGTTGA 1134 0.4145 MGRRKNSSNNQCSSSKEDANMNNHLIFEDADEAVDESSNLDQSMCDIDESDDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSHMADMAKEIVEANGYSNVVTVLKGKIEEIELPVAKVDIIISEWMGYFLLFENMLNSVLYARDKWLVDGGVVLPDKASLYLTAIEDADYKEDKIEFWDKVYGFDMSCIKKQAIMEPLVDTVDQNQIATNCQLLKTMDISKMAPGDASFTAPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPRSRATHWKQTVLYLEDVLTICEGEAIVGSMTVAPNKKNPRDVDIMLKYSLNGRRCNVSRVQYYKMR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03243 377 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 62 376 IPR029063 -
Pumo6g03243 377 Gene3D Vaccinia Virus protein VP39 47 199 IPR029063 -
Pumo6g03243 377 FunFam probable protein arginine N-methyltransferase 1 47 199 - -
Pumo6g03243 377 Gene3D - 201 377 - -
Pumo6g03243 377 Pfam Ribosomal protein L11 methyltransferase (PrmA) 92 168 - -
Pumo6g03243 377 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 21 364 IPR025799 GO:0016274|GO:0018216
Pumo6g03243 377 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 56 357 IPR025799 GO:0016274|GO:0018216
Pumo6g03243 377 FunFam Blast:Protein arginine N-methyltransferase 1 201 377 - -
Pumo6g03243 377 CDD AdoMet_MTases 98 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03243 Pumo-Chr6 75465604 75468555 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03243 1 340 C2H2 Transcription Factor Family AT3G12270 36.141 1.54e-67 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03243 K11434 - gmx:100781777 727.243