Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03239 ATGGAAAACATCAAAGATCCATCGATTTACCGCAATCCAGTCATATTGCAGAGCGAGGACTTAACCAAGTATATACTGGATACTGCTGTTTACCCTCGAGAACCTGAGCCTCTAAAAGAGCTGAGGGAAGTCACTAGTAATCACCCTTGGGGCTTCATGGCTACTTTACCTGATGCGGGTCAGCTAATGACCTTACTTTTGAAGCTGTTGAATCCCAAAAAGACCATTGAAGTGGGAGTCTTTACTGGTTACTCCCTTCTCCTCACCGCACTCAACATTCCTGATGATGGAAAGATTACAGCCATAGATATTGACAGGAAAGCTTATGAGGTTGGTTTACCAGTCATCAAAAAGGCTGGAGTTGAGCACAAGATTGATTTCATAGAGTCTCCAGCTCTACCAGTTTTGGATAAACTACTTGAAGATCCTGCAAATGAAGGATGTTTTGACTTTGCCTTCATTGATGCTGACAAAGAGAACTATGTGAAGTACCATGAGAGGCTTATAAAACTGGTCAAGATTGGTGGGTTACTTGTATATGACAACACACTGTGGGGTGGACGTGTTTCCTGGCCTGAAGACAAAGTTCCACCACACACCAGATCAGGGAGGAACGCAGCAATTGAATTTAACAAAACAATCACAAACGATTCTCGTGTTGAATTTGCTCTTACTTCCGTAGGGGATGGCCTCAATATTTGTAGGCGTGTTGCTTGA 717 0.431 MENIKDPSIYRNPVILQSEDLTKYILDTAVYPREPEPLKELREVTSNHPWGFMATLPDAGQLMTLLLKLLNPKKTIEVGVFTGYSLLLTALNIPDDGKITAIDIDRKAYEVGLPVIKKAGVEHKIDFIESPALPVLDKLLEDPANEGCFDFAFIDADKENYVKYHERLIKLVKIGGLLVYDNTLWGGRVSWPEDKVPPHTRSGRNAAIEFNKTITNDSRVEFALTSVGDGLNICRRVA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03239 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
Pumo6g03239 238 CDD AdoMet_MTases 76 180 - -
Pumo6g03239 238 PANTHER O-METHYLTRANSFERASE-RELATED 12 237 - -
Pumo6g03239 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Pumo6g03239 238 Pfam O-methyltransferase 30 237 IPR002935 GO:0008171
Pumo6g03239 238 Gene3D Vaccinia Virus protein VP39 8 238 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03239 Pumo-Chr6 75393866 75395784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03239 15 237 Monolignol Biosynthesis Gene Families AT4G26220 63.229 8.55e-106 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03239 K00588 - gmx:100800911 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g03239 6 75393866 75395784 Pumo6g03239 6 75393866 75395784 ECH