Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03237 ATGGTGGAGAAGGCGAAGGGTAGGAAGGAGGAGGTGGTTACCCGAGAGTACACCATTAACCTCCACAAGCGCCTCCATGGCTGCACATTTAAGAAGAAAGCTCCCAAAGCAATCAAGGAGATCAGAAAGTTTGCCCAGAAGGCCATGGGGACCAATGATGTGAGGGTGGATGTGAAGTTGAACAAGTATGTCTGGAGCCAGGGAATCAGGAGTGTTCCAAGGAGGATTAGGGTAAGAATTGCTCGCAAGAGGAAATGA 258 0.4961 MVEKAKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKYVWSQGIRSVPRRIRVRIARKRK 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03237 85 Gene3D - 2 85 IPR023621 -
Pumo6g03237 85 Pfam Ribosomal protein L31e 11 85 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pumo6g03237 85 PANTHER 60S RIBOSOMAL PROTEIN L31 2 85 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pumo6g03237 85 CDD Ribosomal_L31e 9 84 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pumo6g03237 85 SMART Ribosomal_L31e_2 10 85 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pumo6g03237 85 FunFam 60S ribosomal protein L31 6 85 - -
Pumo6g03237 85 SUPERFAMILY Ribosomal protein L31e 11 84 IPR023621 -
Pumo6g03237 85 ProSitePatterns Ribosomal protein L31e signature. 54 68 IPR020052 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03237 2 84 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 84.337 5.67e-47 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03237 K02910 - gmx:100810835 139.428