Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03198 ATGGGGAGAGCCACTAGGTGGGTGAAGAGTTTGTTTGGAATAAGAAAAGAGAAAGAGAAGAAACAAAACTCAAAGTGTGGAGAGGCCAAAAGCATGGAATTTTGTTGTTCTGAGAATAGTAGTAATTCAAGAGTTTTGTGTCACAATCCAGGGACTATACCCCCCAACATTTCTCAAGCTGAGGCTGCTTGGTTACAATCCTTGTACACAGAGACGGAGCAAAACAAGCACGCCATCGCAGTTGCTGCTGCCACGGCCGCAGCTGCTGATGCTGCCGTGGCAGCAGCACAGGCTGCGGTGGTGGTTGTTAGGCTCACCAGCCAAGGAAGGGGTGGCACCATGTTTGGTGTTGGACCTGAGATGTGGGCTGCCATCAAGATTCAAACAGTGTTTAGAGGATACCTGGCAAGGAAGGCACTGAGGGCATTAAAAGGATTGGTGAAGTTGCAGGCACTTGTCAGAGGGTATTTAGTGAGGAAGCAAGCAACAGCAACCTTGCATAGTATGCAGGCTCTTGTTAGAGCTCAAGCAACAATTCGGTCCCACAAATCTCGCAGGCTCATGACCACACAGAATGAAGCATATAGATCTCAAAATAGAGCAAGAAGATCCATGGAGAGGTTTGATGACACTAAGAGTGAGTGTGCAGTTCCAATCCACAGTAGAAGGGTATCATCTTCTTTTGATGCTACAATTAATAACAACAACAACAACAGTGTTGATGGGAGCCCCAAAATAGTGGAAGTGGACACTTTCAGGCCTAAGTCAAGGTCTAGAAGGACAATATCAGATTTTGGTGATGAACCATCATTTCAAGCACTTTCTTCTCCCTTACCAGCTTCATACAGAACCCCTACACGTTTGTCCATGCTAGACCAAAGGAATTTTCAGGACTCTGAATGGGGGTTAACAGGAGAAGAGTGCAGATTCTCTACAGCACAAAGCACTCCACGCTTCACAAATTCTTGTAGCTGTGGCTCAGTTGCACCTATGACACCAAAGAGCGTGTGCACTGATAACTTGTTCCTAAAGCAGTATGGGAATTTTCCAAACTACATGGCCAGTACTCAGTCTTTTAAGGCCAAATTGAGGTCTCATAGTGCTCCAAAGCAACGGCCAGAACCTGGTCCAAGGAAGAGGATTTCCCTCAATGAAATGATGGAGTCTAGGAGTAGCTTGAGTGGGGTTAGAATGCAGAGGTCTTGCTCACAGGTTCAAGAAGTCATTAATTTCAAGAATGCTGTGATGGGGAGGCTTCAGAAATCCACATAA 1272 0.4591 MGRATRWVKSLFGIRKEKEKKQNSKCGEAKSMEFCCSENSSNSRVLCHNPGTIPPNISQAEAAWLQSLYTETEQNKHAIAVAAATAAAADAAVAAAQAAVVVVRLTSQGRGGTMFGVGPEMWAAIKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHSMQALVRAQATIRSHKSRRLMTTQNEAYRSQNRARRSMERFDDTKSECAVPIHSRRVSSSFDATINNNNNNSVDGSPKIVEVDTFRPKSRSRRTISDFGDEPSFQALSSPLPASYRTPTRLSMLDQRNFQDSEWGLTGEECRFSTAQSTPRFTNSCSCGSVAPMTPKSVCTDNLFLKQYGNFPNYMASTQSFKAKLRSHSAPKQRPEPGPRKRISLNEMMESRSSLSGVRMQRSCSQVQEVINFKNAVMGRLQKST 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03198 423 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
Pumo6g03198 423 Pfam IQ calmodulin-binding motif 147 161 IPR000048 GO:0005515
Pumo6g03198 423 Pfam IQ calmodulin-binding motif 122 141 IPR000048 GO:0005515
Pumo6g03198 423 PANTHER IQ-DOMAIN 5-RELATED 1 394 - -
Pumo6g03198 423 Pfam Protein of unknown function (DUF4005) 316 394 IPR025064 -
Pumo6g03198 423 SMART iq_5 142 163 IPR000048 GO:0005515
Pumo6g03198 423 SMART iq_5 119 141 IPR000048 GO:0005515
Pumo6g03198 423 ProSiteProfiles IQ motif profile. 168 197 IPR000048 GO:0005515
Pumo6g03198 423 Gene3D - 69 146 - -
Pumo6g03198 423 ProSiteProfiles IQ motif profile. 144 171 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03198 Pumo-Chr6 74847055 74848973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03198 1 398 IQD Protein Family AT3G16490 51.345 1.53e-100 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03198 - - gmx:100788710 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g03198 6 74847055 74848973 Pumo6g03198 6 74847055 74848973 ECH