Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03194 ATGAAAAAATTTACCTCATCACGTGACAAAATGCCAATCCTCTCTCTTCTCTCCTTCTTCCTCCTTCTCACCTATGCAAACTCTCAGTCTCACTCTTTGCTGTATGATCAAGAACATGCAGTCCTATTGAGGATAAAGCAATACCTGCAAAATCCACCATTCCTCAATCACTGGATCCCATCAAAGTCTTCACATTGCACTTGGCCAGAGATCAGATGCACCAATGGCTCAGTCACTTCACTGTTTATGATCAAGACCAACATCACTCAAACACTGCCACCTTTCCTATGTGACCTCACAAACCTCACACATATTGATTTTCAGTGGAATTTCTTTCCTGGGGAGTTCCCAAAATTTCTCTACAACTGCCCCAAGCTTGAGTACCTTGACCTCTCACAGAACTACCTTGTTGGTAAGATTCCTGATGATATTGACCACTTGGCTAGCCTGCGTTTTCTTAGCCTTGGTGGCAACAACTTCTCTGGTGATATTCCAGCTAGCATTGGGAGGTTAAAGGAGCTAAGAAATCTTCAACTTTACCAGTGTCTTTTCAATGGTACTTTCCCTGCTGAAATTGGCAATTTGTCCAACCTTGAGTCCTTGTATGTGTACTCAAACCACATGCTCCCTCCCACAAAGTTGCCATCAAGCTTGACCCAGCTGAACAAATTGAAGGTCTTTCATATGTATGAATCCAACTTGGTAGGGGAAATCCCTGAAGCCATTGGACACATGGTGGCACTGGAGTACTTGGATTTATCAAAAAATGGCTTAAGTGGACAAATTCCCAACGGTTTGTTCATGCTGAAAAATCTGAGCATACTATATCTTTACCGGAACAGCCTCTCTGGCGAGATACCTGGAGTGGTTGAAGCATTCAACTTGACAGAACTTGATCTTTCAGAGAATAGTCTTAGTGGGGAAATACCAGATGATTTGGGAAGGCTCAATAACTTAACATACTTGAATTTGTATAGCAATCAGTTATCTGGGAAGGTACCAGAAAGCATTGGTCGTCTGCCAGCTCTGACGGATTTTATGGTTTTTCTCAACAATTTATCAGGTACTCTTCCTCTTGACTTTGGTCGGTTCTCAAAGCTTGAAACATTTCAGGTTGCATCTAATAGTTTCACAGGAAGGTTGCCAGAGAACTTGTGCTACCATGGAAGTTTAGTTGGTTTAACTGCTTATGACAATAACCTGAGTGGAGAGTTGCCAGAATCCTTGGGAAGTTGCAGTAGCCTGCAAATTCTGAGGGTTGAAAACAATAAGCTTTCTGGTAACATTCCTAGTGGTCTATGGACATCTCTGAGCTTGTCAACATTTATGATAAATGAAAACAAGTTCAGTGGTCAGTTTCCTGAAAGATTGTCTTGGAATCTTTCAGTCCTGTCCATAAGTTACAATCAGTTTTCTGGTAGAATTCCACTTGGAGTGTCTTCCTTGAAGAATGTTGTGAAGTTTAATGCCAGTAACAACCTCTTCAATGGTAGTATTCCACTGGAGCTAACATCTCTTCCCCATCTAGAAACTCTTCAGCTTGATCATAACCAGCTCACAGGGCCACTTCCATCAGATATAATATCATGGAAGTCCCTAACAACTCTAGATCTGAGCCACAATCAACTCTCTGGAGTAATCCCAGATGCAATTGCTCAGTTACCTGGCCTTAATATTTTGGATTTGTCAGAAAACAAAATCTCTGGTCAAATTCCACTTCAACTAGCCCTCAAGAGACTCACAAATCTCAATCTGTCCTCCAATCTTTTGACAGGGAGGATTCCAAGTCAATTAGAAAACCTTGTTTATGCCAGAAGCTTTTTGAACAATTCCGGTCTCTGTGCTGATAGTAAAGTACTAAACCTTACCTTGTGCAATTCTGGGTTACAAAGGGCAAGAATTGAAAGAAGATCTGCGTCTCATGCTATAATCATAAGCCTGGTGGTAGCAGCCTCCTTACTGGCTTTGTTGTCATCATTCTTGTTGATCAGAGTTTACAGAAAAAGAAAGCAAGAATTGAAAAGGTCATGGAAGCTCACTTCCTTTCAGAGGCTGAGTTTCACAAAAACAAATATTGTGTCCTCAATGTCAGAACACAATATTATTGGCAGTGGTGGGTATGGTGCAGTATACCGTGTTGCTGTCGATGATTTAAACTATGTTGCGGTGAAAAAGATATGGGGTAGCAGAAAGTTAGAGGAGAAGCTTGTAAGTTCATTTCTTGCAGAAGTTGAAATACTGAGCAATATTCGCCATAGCAACATTGTAAAGTTGCTATGCTGCATCTCTAATGAGGATTCTCTGCTCCTTGTCTACGAGTATCTGGAAAACCATAGCCTTGATAGGTGGCTGCGCAAGAAAAGTAAGCCAGCAGCTGTGTCAGGTTCAGTCCTTGATTGGCCAAAGAGATTGCATATAGCCATTGGAGCAGCACAAGGTTTGTGCTACATGCATCATGACTGCTTACCACCTGTTGTTCATCGCGATGTGAAAACAAGTAACATTCTGTTGGATTCTCAATTCAATGCAAAAGTTGCTGACTTTGGTCTGGCCAAGATGTTGATGAAGCCAGAAGAACTTGCTACCATGTCAGCTGTAGCCGGCACATTTGGCTATATTGCTCCAGAATATGCTCAAACAACAAGAGTCAATGAGAAGATAGATGTCTATAGCTTTGGAGTTGTCCTATTGGAACTGACAACTGGAAAAGAAGCTAATCATGGAGATGAATACTCATCTCTTGCGGAATGGGTGTGGCGCCACATTCAGATAGGGACCGATGTAGAAGACATTTTGGATGAAGAAATTAAGGAAGCTTGTTACATGGATGAAATTTGCAACATCTTCAAACTAGGGGTCAAGTGCACTGCAACACTGCCAGCTAGTAGACCTTCCATGAAGGAAGTCCTGAAAATATTGCTCACCTGCAGCAATCCACTTACCAATGGAGAGAAGAATGTTTTCTATGATTCTGTTCCACTTCTTAAGAATTCAAATTGGGAAAAACAAGTGGAATATTATTCTGATGATGATTGA 3036 0.414 MKKFTSSRDKMPILSLLSFFLLLTYANSQSHSLLYDQEHAVLLRIKQYLQNPPFLNHWIPSKSSHCTWPEIRCTNGSVTSLFMIKTNITQTLPPFLCDLTNLTHIDFQWNFFPGEFPKFLYNCPKLEYLDLSQNYLVGKIPDDIDHLASLRFLSLGGNNFSGDIPASIGRLKELRNLQLYQCLFNGTFPAEIGNLSNLESLYVYSNHMLPPTKLPSSLTQLNKLKVFHMYESNLVGEIPEAIGHMVALEYLDLSKNGLSGQIPNGLFMLKNLSILYLYRNSLSGEIPGVVEAFNLTELDLSENSLSGEIPDDLGRLNNLTYLNLYSNQLSGKVPESIGRLPALTDFMVFLNNLSGTLPLDFGRFSKLETFQVASNSFTGRLPENLCYHGSLVGLTAYDNNLSGELPESLGSCSSLQILRVENNKLSGNIPSGLWTSLSLSTFMINENKFSGQFPERLSWNLSVLSISYNQFSGRIPLGVSSLKNVVKFNASNNLFNGSIPLELTSLPHLETLQLDHNQLTGPLPSDIISWKSLTTLDLSHNQLSGVIPDAIAQLPGLNILDLSENKISGQIPLQLALKRLTNLNLSSNLLTGRIPSQLENLVYARSFLNNSGLCADSKVLNLTLCNSGLQRARIERRSASHAIIISLVVAASLLALLSSFLLIRVYRKRKQELKRSWKLTSFQRLSFTKTNIVSSMSEHNIIGSGGYGAVYRVAVDDLNYVAVKKIWGSRKLEEKLVSSFLAEVEILSNIRHSNIVKLLCCISNEDSLLLVYEYLENHSLDRWLRKKSKPAAVSGSVLDWPKRLHIAIGAAQGLCYMHHDCLPPVVHRDVKTSNILLDSQFNAKVADFGLAKMLMKPEELATMSAVAGTFGYIAPEYAQTTRVNEKIDVYSFGVVLLELTTGKEANHGDEYSSLAEWVWRHIQIGTDVEDILDEEIKEACYMDEICNIFKLGVKCTATLPASRPSMKEVLKILLTCSNPLTNGEKNVFYDSVPLLKNSNWEKQVEYYSDDD 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03194 1011 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 191 291 - -
Pumo6g03194 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Pumo6g03194 1011 Pfam Leucine Rich Repeat 294 315 IPR001611 GO:0005515
Pumo6g03194 1011 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 248 973 - -
Pumo6g03194 1011 Gene3D Ribonuclease Inhibitor 348 624 IPR032675 -
Pumo6g03194 1011 SMART LRR_typ_2 195 221 IPR003591 -
Pumo6g03194 1011 SMART LRR_typ_2 531 553 IPR003591 -
Pumo6g03194 1011 SMART LRR_typ_2 506 530 IPR003591 -
Pumo6g03194 1011 SMART LRR_typ_2 245 269 IPR003591 -
Pumo6g03194 1011 SMART LRR_typ_2 147 171 IPR003591 -
Pumo6g03194 1011 SMART LRR_typ_2 316 340 IPR003591 -
Pumo6g03194 1011 SMART LRR_typ_2 412 436 IPR003591 -
Pumo6g03194 1011 SMART LRR_typ_2 577 601 IPR003591 -
Pumo6g03194 1011 Gene3D Transferase(Phosphotransferase) domain 1 775 990 - -
Pumo6g03194 1011 Pfam Protein kinase domain 698 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g03194 1011 SUPERFAMILY RNI-like 293 605 - -
Pumo6g03194 1011 Gene3D Ribonuclease Inhibitor 187 291 IPR032675 -
Pumo6g03194 1011 Gene3D Ribonuclease Inhibitor 35 186 IPR032675 -
Pumo6g03194 1011 ProSiteProfiles Leucine-rich repeat profile. 532 554 IPR001611 GO:0005515
Pumo6g03194 1011 FunFam Kinase family with leucine-rich repeat domain-containing protein 775 988 - -
Pumo6g03194 1011 FunFam Receptor-like protein kinase HSL1 isoform A 299 625 - -
Pumo6g03194 1011 Gene3D Phosphorylase Kinase; domain 1 678 774 - -
Pumo6g03194 1011 Gene3D Ribonuclease Inhibitor 292 347 IPR032675 -
Pumo6g03194 1011 ProSiteProfiles Protein kinase domain profile. 696 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo6g03194 1011 FunFam Receptor-like protein kinase HSL1 676 774 - -
Pumo6g03194 1011 Pfam Leucine rich repeat 116 160 IPR001611 GO:0005515
Pumo6g03194 1011 Pfam Leucine rich repeat 507 567 IPR001611 GO:0005515
Pumo6g03194 1011 PRINTS Leucine-rich repeat signature 554 567 - -
Pumo6g03194 1011 PRINTS Leucine-rich repeat signature 533 546 - -
Pumo6g03194 1011 SUPERFAMILY L domain-like 44 378 - -
Pumo6g03194 1011 Pfam Leucine rich repeat N-terminal domain 37 73 IPR013210 -
Pumo6g03194 1011 ProSitePatterns Protein kinases ATP-binding region signature. 702 725 IPR017441 GO:0005524
Pumo6g03194 1011 FunFam Receptor-like protein kinase HSL1 isoform A 35 186 - -
Pumo6g03194 1011 SUPERFAMILY Protein kinase-like (PK-like) 687 974 IPR011009 -
Pumo6g03194 1011 SMART serkin_6 696 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03194 Pumo-Chr6 74766429 74770025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03194 38 1011 Receptor kinase-like Gene Family AT5G25930 51.682 0.0 976
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo6g03194 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03194 - - gmx:100785907 1792.7