Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03179 ATGGGTAAGGTTCACGGGTCACTCGCACGTGCCGGAAAAGTGAGAGGCCAAACCCCTAAAGTGGCCAAACAAGACAAGAAGAAGAAACCACGTGGACGCGCCCACAAGCGCATGCAGTACAATCGCCGATTCGTCACCGCCGTTGTGGGATTCGGCAAAAAGGGACCCAATTCATCTTCCAAGAATGGAATGTGCACATGTTCTGTTATTAGATGCATGGCATGGATGATTCATGGTTGGTTTTGCCATGCTATGAAGAATCTGGTGGGGCTGCCCCAAACTAAACTAGAATACTATGGAAGCAATAATTTCCAGCTAAATAATCCAGAGGAAGCAAAGTGCCGGAATCTTTTGGAGGAGTATCAAACACTTGAGTGCCAACCTCAGAAGAATGAGGATATTTTAGCTAATGGCTCACCTAGACATTCCAACTCCTACTAA 441 0.4649 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKGPNSSSKNGMCTCSVIRCMAWMIHGWFCHAMKNLVGLPQTKLEYYGSNNFQLNNPEEAKCRNLLEEYQTLECQPQKNEDILANGSPRHSNSY 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03179 146 MobiDBLite consensus disorder prediction 1 36 - -
Pumo6g03179 146 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 1 64 - -
Pumo6g03179 146 MobiDBLite consensus disorder prediction 22 36 - -
Pumo6g03179 146 Pfam Ribosomal protein S30 3 58 IPR006846 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03179 Pumo-Chr6 74593676 74595488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03179 1 61 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 93.548 1.81e-26 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03179 K02983 - csin:114311741 110.153