Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03157 ATGGCTTCTTCAATTCGTCCCTCACTTTCTTCCTTCATGTTACCCTCCCTCTCCTCATGCAACCCTTCTCAAAAGCTCTCTCTTTTTCATCTCGGTAGCGCAGGTGTTAGACATTTTCATAAGTTTGGCCTGAAAGCTTCTAGGTTTTTGAGACTTGATGATAAGTGCACGAGAGTGATGGCATCTGGGAACATGTCCACAGCTGCTACACAGGAAAATGTGTTACGTTGGGTCAAACATGACAAGAGAAGAATGCTTCATGTTGTGTATCGTGTTGGGGATTTGGACAAGACCATAAAATTTTATAAAGAGTGCCTCGGAATGAAGTTGCTCAGAAAGCGTGACATGCAAGAGCAGAGATATACTAATGCCTTTCTTGGATATGGGCCTGAGGATGCACACTTTGCTGTTGAACTGACATACAATTATGGGATTGAAAAGTATGACATTGGAGATGGATTTGGCCATTTTGGTCTTGCTGTTGATGATATTTCAAGAATTGTGGAACTTGTTAGAGCGAAGGGTGGGAAAATTACTAGAGAGCCTAGTCCTGTCAACGGAGGCAACTCAATAATTGCATATATTGAAGATCCCGATGGTTATGAATTTGAACTTTCGGAAAGGGCTCCCTCTCCTGAGCCTTTGTGCAAAGTAATGCTTCGAGTGGGTGATATTGATCGTTCCATTAAATTTTATGAGAAGGCTTTTGGTATGGAGCTACTTCGAACACAAGATGATCCAGAATCCAAGAGTACAATAGCAATTATGGGTTATGGTCCAGAGGAAAAAAATACTGTCCTGGAATTGACTTACAACTATGGAGTCACAGACTATGATAAAGGAGATGCTTATGCTCAGATTACAATAGGCACAGATGATGTGTACAAAACTGCAGAAGCAATTAAACTTGCTGGAGGGAAGATTACTCGGGAACCTGGACCAGTACCTGGTATCAAAACAAAGATCACATCATGTGTGGATCCTGATGGTTGGAAAACTGTTTTTGTAGATAATGTTGACTTTGGTAGGGAGTTGGAGTAG 1041 0.415 MASSIRPSLSSFMLPSLSSCNPSQKLSLFHLGSAGVRHFHKFGLKASRFLRLDDKCTRVMASGNMSTAATQENVLRWVKHDKRRMLHVVYRVGDLDKTIKFYKECLGMKLLRKRDMQEQRYTNAFLGYGPEDAHFAVELTYNYGIEKYDIGDGFGHFGLAVDDISRIVELVRAKGGKITREPSPVNGGNSIIAYIEDPDGYEFELSERAPSPEPLCKVMLRVGDIDRSIKFYEKAFGMELLRTQDDPESKSTIAIMGYGPEEKNTVLELTYNYGVTDYDKGDAYAQITIGTDDVYKTAEAIKLAGGKITREPGPVPGIKTKITSCVDPDGWKTVFVDNVDFGRELE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03157 346 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 84 208 IPR037523 -
Pumo6g03157 346 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 84 210 IPR029068 -
Pumo6g03157 346 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 214 338 IPR037523 -
Pumo6g03157 346 Gene3D - 211 345 IPR029068 -
Pumo6g03157 346 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Pumo6g03157 346 CDD GlxI_Ni 85 205 - -
Pumo6g03157 346 Gene3D - 57 210 IPR029068 -
Pumo6g03157 346 PANTHER LACTOYLGLUTATHIONE LYASE 61 346 - -
Pumo6g03157 346 FunFam Lactoylglutathione lyase 211 346 - -
Pumo6g03157 346 NCBIfam lactoylglutathione lyase 84 208 IPR004361 GO:0004462|GO:0046872
Pumo6g03157 346 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 85 205 IPR004360 -
Pumo6g03157 346 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 218 332 IPR004360 -
Pumo6g03157 346 ProSitePatterns Glyoxalase I signature 1. 87 108 IPR018146 GO:0004462|GO:0046872
Pumo6g03157 346 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 216 338 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03157 Pumo-Chr6 74157743 74161526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03157 217 335 Calmodulin-binding Proteins AT1G08110 26.207 1.52e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03157 K01759 - gmx:100781439 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g03157 6 74157743 74161526 Pumo6g03157 6 74157743 74161526 ECH
Pumo6g03157 6 74157743 74161526 Pumo6g03157 6 74157743 74161526 PCT