Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03133 ATGTATAGACCATTCATGTCATGTGATGATCCAAAAGGGGTTGTTGAGTGTGGGGCAATAAGGAAATACAGGACCAGTTCTCAGAAAATGAAGGAAAAGACAAAAAGTAGGAGGCCGGCTGAGACATCCTTGGCAAACAAACAAGACAAAGAAGAGAAGGTTTCAAAAGGATCCTCAGAAAGGTCCTTTGATCCATCATCCTTGCAACTCATGGAGGTATCCAGAGGGGCTCAAAGGTTGAACAACATGATTGATTCATGGTCTAGGGGTCTTAGGTATGATGGAAGGTCTGAAGATATAGCAAAAGATTTGCTGAAAGGGGCTCTTGACCTGCAAGAGTCTCTACTAATGCTTCGCAAGGTGCAAGAAGCTTCTCAACACTGTCAACACATGGCTAGTTTGAAGAGAAAACAAAATGGGAAGCCTGAAAGAGGAAGAATTGATGCAAAGGTGATTGATGGAACTACACATTGTGATCATTTTGGTGAACAAAGTTATCCAATGGGGTTCCAAAGACGTTGGCCTACAGCTGATGGTTCTTCAAGTAGTTGCAATGAGGAGCTCAAGAAAGTGATTAAAGAGAGCCTGGTTAGGCAAAATTTGTTCACAACCATTGAAGGGTTGGATTCAGCATCCACATTCCACTCTACAAACTCAAGCCAATCTTCTGTGGCTTGGAATGATAGGCTTTCTGATTCTTCTTTCTCACCAACAACTTCAAGGAGGGAAAGAGGATCCAATCTGGTTGCCAAGCTGATGGGTTTAGAAGAAGCCCCTTCAAGATCATTTCCAGCTGTTATGCAGAAACAGTTGGAGAGTCCAAAGATTCTGAATCAGAAGAGACCTATATTTGACATAGATATGCCTAAGGTAAGAAAAAATGTTGAGAAGGTTAATCTTGAACATAAGATGACCTTGAAGGAAATTCTTGAGACTACTCATTTCAATGGACTTTTGAAGAGTCCTGTCAGAGAGCCTAAGGTTCAGGTCCATCATTCCATTGATCCACATTACAAACATTTTGGTGATTTACCTCCTATTGTACTTATGAAACCTCGATGTACTCCATATCAGGAATGTGCGAAAAGTTATGAGCATGTTGTTCCTCGAGAAGAGTTTTCCCTTAGAAATCTAAAAGCTAAAGTTGTCCCTTCCAAAGTATTCCAACACAAAGAAGGCTCAACCACCAACATGGGGAAAAAAATGGAAGAACATGTATCCAAAAGGCTTGCCAAAGAAGAAAGAACTAAGCTCCTCAGAGAGGTTGTGGTGCTGAAGGAAAAAGAAATCAAGCCTATTGAAAATGAGAAGGCTCCAGGAGGTAAGGTAAAACTGCTTAGTCATGTCAATCACAAATCACAGGTAAATGAAACTGTTGATAAAAAGGCAAAGGTAAAGACCATTACCACTAGTAGAAAGCTACCAGAAAAGGAGGTTCCGAAACCCAAACAACAACAACAAAGCCTTATCCCACTGGGTGAAGTTTCAAAACCCAAAGTTGTGACAAAATCTCAGGATCAAGGAGAAATCAACTCTACAAGTACAAAGTTGAGGAAGCCACAAAGTGGGTCCAGAATTGACAAGAATGAGATTCCCAGCAGAAAGAGCACTGCTTCAAATTCAAACACCATCTCAAAACCAAAGAGTCAAAAAATCAGTAATACCAATTCCAAGGAGCAGAAAAAGAATCAGATGAAGAGGCAAAGGCCTGCTGTTGCTGAGCCTGAAGCAGCTAAACCAGTTGATGAACAGTTGGGACAAGAAGAAGCAAATAGCCTTGATGTTTCTTGTAAAGATGATTGCCCTGAGATTAGAATAATCACTACAATAACAGATGATCTCGTGGTGGAGCATGAAGAAGTAGATACATCTGCAAATAAGATTAGAGAAATTTGTGAGCAAAGCCAGAGTTCTTCTAGTAATGATATTTTGATGCTTAAGTTTGAACATGAAAATGATGCTATCCCTGCTGAGGAAGCTCATAGCATCACCAATATCAGTGAAACCGATCGTGAGCCTGACAAAGACAGTTCTGAGCTGAAATATTTGCTTCTAACTAGTCAATCATTTATTGGACATGCAGAGGAGCTCCTCAATCTTGATGTTGATTGTCCCAAGATCCCACCAAGAAGTGAAACTAAGGAAATAGCCAATCTCAGACTCTATTTGGATTGTGCAAATGAACTCACTGAGCGCAAAAGCCTTCAGGGCTCACAAGCAATTCACCCTTTATTGCTAACTTGTGCAGGGCATTCAAGATTACAAATCTCTTTAGGGAGGTTGGTTGATGAAGTTTATAGTGCCATTGAGCATCTAACATCTTACAGTGAAAAACTAGCTTCAGATAATATATATGCAATGATGGAGAGAGATATAAAGAGCAACAATGGACTGATAAATGGAATATGGAACTGGGGTTGGAGGCATGGATTTTCTGCAGATGAAGCTGAGCAAGTTGTCAATGAAGTAGAGAACCTAGTTTTAGGTGGATTGATTGAGGAGGTAATTGTAAATTTATGA 2520 0.4028 MYRPFMSCDDPKGVVECGAIRKYRTSSQKMKEKTKSRRPAETSLANKQDKEEKVSKGSSERSFDPSSLQLMEVSRGAQRLNNMIDSWSRGLRYDGRSEDIAKDLLKGALDLQESLLMLRKVQEASQHCQHMASLKRKQNGKPERGRIDAKVIDGTTHCDHFGEQSYPMGFQRRWPTADGSSSSCNEELKKVIKESLVRQNLFTTIEGLDSASTFHSTNSSQSSVAWNDRLSDSSFSPTTSRRERGSNLVAKLMGLEEAPSRSFPAVMQKQLESPKILNQKRPIFDIDMPKVRKNVEKVNLEHKMTLKEILETTHFNGLLKSPVREPKVQVHHSIDPHYKHFGDLPPIVLMKPRCTPYQECAKSYEHVVPREEFSLRNLKAKVVPSKVFQHKEGSTTNMGKKMEEHVSKRLAKEERTKLLREVVVLKEKEIKPIENEKAPGGKVKLLSHVNHKSQVNETVDKKAKVKTITTSRKLPEKEVPKPKQQQQSLIPLGEVSKPKVVTKSQDQGEINSTSTKLRKPQSGSRIDKNEIPSRKSTASNSNTISKPKSQKISNTNSKEQKKNQMKRQRPAVAEPEAAKPVDEQLGQEEANSLDVSCKDDCPEIRIITTITDDLVVEHEEVDTSANKIREICEQSQSSSSNDILMLKFEHENDAIPAEEAHSITNISETDREPDKDSSELKYLLLTSQSFIGHAEELLNLDVDCPKIPPRSETKEIANLRLYLDCANELTERKSLQGSQAIHPLLLTCAGHSRLQISLGRLVDEVYSAIEHLTSYSEKLASDNIYAMMERDIKSNNGLINGIWNWGWRHGFSADEAEQVVNEVENLVLGGLIEEVIVNL 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03133 839 MobiDBLite consensus disorder prediction 212 243 - -
Pumo6g03133 839 MobiDBLite consensus disorder prediction 500 520 - -
Pumo6g03133 839 MobiDBLite consensus disorder prediction 454 594 - -
Pumo6g03133 839 MobiDBLite consensus disorder prediction 25 66 - -
Pumo6g03133 839 MobiDBLite consensus disorder prediction 25 59 - -
Pumo6g03133 839 MobiDBLite consensus disorder prediction 454 480 - -
Pumo6g03133 839 Coils Coil 408 428 - -
Pumo6g03133 839 PANTHER OS01G0228800 PROTEIN-RELATED 1 838 - -
Pumo6g03133 839 MobiDBLite consensus disorder prediction 533 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03133 Pumo-Chr6 73832111 73836466 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03133 672 836 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 32.955 1.67e-21 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03133 - - gmx:100797863 1468.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g03133 6 73832111 73836466 Pumo6g03133 6 73832111 73836466 ECH
Pumo6g03133 6 73832111 73836466 Pumo6g03133 6 73832111 73836466 PCT