Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03111 ATGAGTGTGGTTGGGAGAGCGATGCCGCGATCCAATTCCGCCGTGCACCACCACCGTCAGAGCTCCGATAACTTCATGCTCGACGCTCACGGAAGGTGGTTACACTCTTCGAGTTTCGCGCAGGAGTTCGGGACTCGATCTTCGAGCTTGAGGAAAAACGACGATGATCGCGTTTTAACCAGTGGCTTGCTTGATCTGCATTCTTTCGACACCGAGCTTTTACCTGAGATGTATGGTGTTCACAATGAATTTTTAACGAATCATACTGTTCGGGGACAAAGTTTTGATGACTACGAGTCAATTCTCTCTGGCAACAAACTTGTACAAAAGTCTCGAGGCTTGCCTGAGAGCCATCTCCTTAAAAGTGTCTCAGCAGATAAAGAGAGAGCAAACAATGTTGCCAAGATCAAAGTTGTGGTTCGGAAGAGACCACTAAATAAGAAGGAAACAGCAAAGAGAGAGGAAGACATTATTTCCATAGATTCAAATTTTCTCACAGTGCATGAAAGAAAACTAAAGGTTGACTTAACAGAATATGTTGAGAAACATGAGTTTGTTTTTGATGCTGTGCTGAATGAAGATGTTTCAAATGATGAAGTGTATGCTGAGACTGTGGAGCCGATTGTTCCACTGATTTTCCAACGAACAAAAGCAACTTGCTTTGCATATGGTCAAACTGGGAGTGGGAAGACATATACTATGCAACCATTGCCTCTCAAAGCATCCCACGATATTTTAAGATTAATGCACCACACATACTGGAACCAAGGTTTCCAACTGTTTGTTAGTTTCTTCGAAATATATGGGGGAAAACTTTTTGATCTCCTCAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGGAAACAGCAGGTTTGCATTGTTGGCTTGCAAGAATATAGAGTATCTAAAGTTGAGACAATCAAGGAATTTATTGAGAGAGGAAATGCCGCAAGAAGTACTGGTACAACTGGAGCAAATGAGGAATCCTCTCGATCACATGCAATACTTCAGCTTTGTATTAAGAGATCAGCTGATGGGACTGAATCAAAGCCTGCTCGACTTGTGGGCAAACTATCTTTTATAGATCTAGCTGGAAGTGAACGCGGTGCAGATACTACAGATAATGACAAGCAGACTAGGATTGAAGGGGCAGAAATAAATAAAAGCTTACTTGCTCTGAAAGAATGCATTAGAGCTCTTGACAATGACCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACTGAAGTTCTGCGAGATTCTTTTGTTGGTGATTCGCGCACTGTAATGATATCATGCATTTCACCTAGCTCAGGTTCTTGCGAGCATACTCTTAACACATTAAGATATGCTGACAGAGTGAAGAGCCTGTCAAAAGGGAACAGCTCTAGAAGGGATCCCCTTTCTTCCTCAAACCTTAGAGACTCCACTGTGTTGCCTGGGTCTACATCTCATGATGATACCTTGGAGGATGAAATAACATATGTTTCCAGTGACAGGAATCGATTTGGTTGGCCCAAACAGCTGGAAAGAGAACCCTCTCCTCCGAATAATGTGGACCGTGTTTCAAGTGGTAGAATGGGGGGAAATTTGGCACCATCTGTGTATTCTGATCCACAAGATGGTCAAAGAGGCAGTCAAAATGCCAGAACTGCAAATGAATATGATTACCTAGGACCAACATATGAACAAGACAGAACAAGAAAAACAAGTAAGAGGGTGGATAACAACCAATTATCTGCTGTGGAGGACAAGAGGAAGATAGAATCTCGTGTTAAACATGTGAATGAATCACATTTTGAAGCTAATCATTCTGATCCCGACGATAATTTAAATGCCCTCCTGAAGGAAGAGGAAGATCTTGTAACTGCTCACCGGAGACAGGTGGAGGAAACAATAGACATTGTTAGGGAGGAGATGAATTTACTCGTTGAAGCTGACCAACCAGGAAATCAACTGGATGATTATATTTCCAAGTTGAATACCATTTTATCACAAAAGGCTGCAGGAATCTTTCAATTGCAGACACAGTTAGCTCAATTTCAGAGGCGTTTAAATGAGTATAATGTTTTCATATCTTCTGGTAATTGA 2094 0.4174 MSVVGRAMPRSNSAVHHHRQSSDNFMLDAHGRWLHSSSFAQEFGTRSSSLRKNDDDRVLTSGLLDLHSFDTELLPEMYGVHNEFLTNHTVRGQSFDDYESILSGNKLVQKSRGLPESHLLKSVSADKERANNVAKIKVVVRKRPLNKKETAKREEDIISIDSNFLTVHERKLKVDLTEYVEKHEFVFDAVLNEDVSNDEVYAETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASHDILRLMHHTYWNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSKVETIKEFIERGNAARSTGTTGANEESSRSHAILQLCIKRSADGTESKPARLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNSSRRDPLSSSNLRDSTVLPGSTSHDDTLEDEITYVSSDRNRFGWPKQLEREPSPPNNVDRVSSGRMGGNLAPSVYSDPQDGQRGSQNARTANEYDYLGPTYEQDRTRKTSKRVDNNQLSAVEDKRKIESRVKHVNESHFEANHSDPDDNLNALLKEEEDLVTAHRRQVEETIDIVREEMNLLVEADQPGNQLDDYISKLNTILSQKAAGIFQLQTQLAQFQRRLNEYNVFISSGN 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03111 697 Gene3D Kinesin motor domain 115 461 IPR036961 -
Pumo6g03111 697 PANTHER KINESIN-RELATED PROTEIN 6 46 691 IPR027640 GO:0003777|GO:0007018
Pumo6g03111 697 MobiDBLite consensus disorder prediction 462 485 - -
Pumo6g03111 697 MobiDBLite consensus disorder prediction 457 491 - -
Pumo6g03111 697 Pfam Kinesin motor domain 141 457 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g03111 697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 458 IPR027417 -
Pumo6g03111 697 SMART kinesin_4 133 464 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g03111 697 MobiDBLite consensus disorder prediction 1 21 - -
Pumo6g03111 697 ProSitePatterns Kinesin motor domain signature. 357 368 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo6g03111 697 MobiDBLite consensus disorder prediction 562 578 - -
Pumo6g03111 697 MobiDBLite consensus disorder prediction 537 555 - -
Pumo6g03111 697 Coils Coil 627 647 - -
Pumo6g03111 697 PRINTS Kinesin heavy chain signature 215 236 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g03111 697 PRINTS Kinesin heavy chain signature 408 429 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g03111 697 PRINTS Kinesin heavy chain signature 358 376 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g03111 697 PRINTS Kinesin heavy chain signature 324 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo6g03111 697 MobiDBLite consensus disorder prediction 505 578 - -
Pumo6g03111 697 FunFam Kinesin-like protein 116 461 - -
Pumo6g03111 697 CDD KISc_KIF2_like 135 456 - -
Pumo6g03111 697 ProSiteProfiles Kinesin motor domain profile. 135 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03111 Pumo-Chr6 73590546 73596063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03111 134 458 Calmodulin-binding Proteins AT5G65930 34.925 8.74e-45 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03111 K10393 - gmx:100783382 1286.55