Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g03102 ATGGCAAATCTCAGCAATGGCCACTTAGAATCCTTTGTCAAGATTCCAACAGTAAAGTTTACCAAGCTTTTCATCAATGGAGAATTCCTGGATTCTGTTTCAGGAAAAACGTTTGAGACTGTTGACCCAAGAACAGAGGAAGTGATTGCTGAAATAGCAGAGGCTAGCAAAGAAGATGTTGATATTGCTGTGAAGGCCGCACGTGAAGCATTTGATTGTGGTCCATGGCCACGCATGCCCGGTGCTGAAAGAGCAAAGATTATGCTGAAATGGTCACAGCTAATTGAACAGAACGCAGAGGAAATAGCAGCATTGGACACCATTGATGGGGGAAAGCTATTCAGTTGGTGTAAGGCTGTGGACATTCCTGAAGCATCCAACATCCTGCGTTACTATGCTGGTGCTGCTGATAAAATTCATGGAGATGTGTTCAAAACATCTCGTGACCTCCACTTGTATTCTCTTATGGAACCTGTTGGTGTTGTTGGACACATTATCCCTTGGAATTTCCCTACCGTCATGTTTTTCGCCAAGGTCGCCCCGGCCATGGCTGCTGGCTGCACCATGGTCATCAAGCCTGCTGAGCAAACACCTCTCTCATCACTCTTTTATGCTCATCTTGCTAAGCTGGCTGGTATCCCAGATGGAGTGCTCAATGTAGTGCCCGGATTTGGATCAATTGCAGGGGCTGCAATAAGTTCACATATGGACATTGATGCGGTCAGTTTTACAGGTTCAACAGAAACAGGTCGTAAAATAATGCAGGCTGCGGCTTTAAGCAATTTGAAACCTGTTTCACTCGAATTAGGAGGCAAGTCTCCAGTTTTGGTTTTTGATGATGCTGATGTAGACAAAGCTGTTGACCTTGCTCTCTTTGGCATCCTACACAACAAGGGAGAAATCTGTGTTGCATTCTCCAGAGTTTTTGTCCAGGAAGGGATATATGATGAATTTGAGAAGAAGGTAGTGGAGAAGGCTAAAGCTTGGGTAGTGGGGGACCCTTTTGATCCTAAAGTTCAGCAAGGACCCCAAACTAGTAAGGCACAATTTGATAAAATTCTTTCCTATATTGAGCATGGAAAGACTGAAGGAGCCACACTGTTGACTGGGGGTAAGCCAGTGGGCAACAAGGGATACTACATTGAGCCTACCATTTTTACCAATGTTAAGGAGGACATGCTAATTGCACAAGAGGAAATATTTGGACCTGTGATGACACTTTCCAAGTTCCAGACCATTGAGGATGCAATTGAGAAAGCAAACAACTCCAAATATGGCCTAGCAGCAGGGATTGTGACCAAGAACTTGGATATTTCAAACACTGTTTCAAGGTCCATCCGTGCAGGCATCATTTGGATCAACTGCTTCTTTGCCTTTGATATTGACTGTCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAGAGATTATGGACTGGAAGCACTTCATAAGTTTCTCAAAGTTAAATCTGTTGCAACTCCTATTTACAATTCTCCTTGGCTTTGA 1506 0.4389 MANLSNGHLESFVKIPTVKFTKLFINGEFLDSVSGKTFETVDPRTEEVIAEIAEASKEDVDIAVKAAREAFDCGPWPRMPGAERAKIMLKWSQLIEQNAEEIAALDTIDGGKLFSWCKAVDIPEASNILRYYAGAADKIHGDVFKTSRDLHLYSLMEPVGVVGHIIPWNFPTVMFFAKVAPAMAAGCTMVIKPAEQTPLSSLFYAHLAKLAGIPDGVLNVVPGFGSIAGAAISSHMDIDAVSFTGSTETGRKIMQAAALSNLKPVSLELGGKSPVLVFDDADVDKAVDLALFGILHNKGEICVAFSRVFVQEGIYDEFEKKVVEKAKAWVVGDPFDPKVQQGPQTSKAQFDKILSYIEHGKTEGATLLTGGKPVGNKGYYIEPTIFTNVKEDMLIAQEEIFGPVMTLSKFQTIEDAIEKANNSKYGLAAGIVTKNLDISNTVSRSIRAGIIWINCFFAFDIDCPFGGYKMSGFGRDYGLEALHKFLKVKSVATPIYNSPWL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g03102 501 SUPERFAMILY ALDH-like 13 497 IPR016161 GO:0016491
Pumo6g03102 501 FunFam Aldehyde dehydrogenase, putative 463 489 - -
Pumo6g03102 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Pumo6g03102 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Pumo6g03102 501 FunFam Aldehyde dehydrogenase3 271 460 - -
Pumo6g03102 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Pumo6g03102 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 14 492 - -
Pumo6g03102 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Pumo6g03102 501 Pfam Aldehyde dehydrogenase family 32 491 IPR015590 GO:0016491
Pumo6g03102 501 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 25 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g03102 Pumo-Chr6 73524186 73528741 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g03102 13 501 Aldehyde Dehydrogenase Gene Family AT3G24503 69.388 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g03102 K12355 - gmx:100784449 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g03101 6 73492439 73498768 Pumo6g03102 6 73524186 73528741 PCT